Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PHTF2Q8N3S3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PHTF2Q8N3S3 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PHTF2Q8N3S3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PHTF2Q8N3S3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PHTF2Q8N3S3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.64■□□□□ 0.57
PHTF2Q8N3S3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.64■□□□□ 0.57
PHTF2Q8N3S3 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PHTF2Q8N3S3 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PHTF2Q8N3S3 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PHTF2Q8N3S3 AP000347.1-202ENST00000435868 847 ntBASIC18.64■□□□□ 0.57
PHTF2Q8N3S3 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.64■□□□□ 0.57
PHTF2Q8N3S3 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.64■□□□□ 0.57
PHTF2Q8N3S3 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PHTF2Q8N3S3 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PHTF2Q8N3S3 AP002469.2-201ENST00000531724 424 ntBASIC18.64■□□□□ 0.57
PHTF2Q8N3S3 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.64■□□□□ 0.57
PHTF2Q8N3S3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
PHTF2Q8N3S3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PHTF2Q8N3S3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
PHTF2Q8N3S3 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PHTF2Q8N3S3 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PHTF2Q8N3S3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.64■□□□□ 0.57
PHTF2Q8N3S3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PHTF2Q8N3S3 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.64■□□□□ 0.57
PHTF2Q8N3S3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.64■□□□□ 0.57
PHTF2Q8N3S3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PHTF2Q8N3S3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.64■□□□□ 0.57
PHTF2Q8N3S3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PHTF2Q8N3S3 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.63■□□□□ 0.57
PHTF2Q8N3S3 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PHTF2Q8N3S3 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHTF2Q8N3S3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHTF2Q8N3S3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PHTF2Q8N3S3 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PHTF2Q8N3S3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.63■□□□□ 0.57
PHTF2Q8N3S3 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.63■□□□□ 0.57
PHTF2Q8N3S3 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
PHTF2Q8N3S3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHTF2Q8N3S3 VENTXP7-201ENST00000475503 772 ntBASIC18.63■□□□□ 0.57
PHTF2Q8N3S3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.63■□□□□ 0.57
PHTF2Q8N3S3 AC106795.1-205ENST00000512851 1056 ntBASIC18.63■□□□□ 0.57
PHTF2Q8N3S3 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.63■□□□□ 0.57
PHTF2Q8N3S3 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.63■□□□□ 0.57
PHTF2Q8N3S3 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.63■□□□□ 0.57
PHTF2Q8N3S3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHTF2Q8N3S3 LINC01711-201ENST00000598340 967 ntBASIC18.63■□□□□ 0.57
PHTF2Q8N3S3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.63■□□□□ 0.57
PHTF2Q8N3S3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PHTF2Q8N3S3 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHTF2Q8N3S3 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHTF2Q8N3S3 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PHTF2Q8N3S3 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHTF2Q8N3S3 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PHTF2Q8N3S3 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHTF2Q8N3S3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PHTF2Q8N3S3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHTF2Q8N3S3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PHTF2Q8N3S3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHTF2Q8N3S3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.63■□□□□ 0.57
PHTF2Q8N3S3 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.63■□□□□ 0.57
PHTF2Q8N3S3 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHTF2Q8N3S3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHTF2Q8N3S3 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.63■□□□□ 0.57
PHTF2Q8N3S3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHTF2Q8N3S3 AL024508.2-201ENST00000607749 1894 ntBASIC18.63■□□□□ 0.57
PHTF2Q8N3S3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PHTF2Q8N3S3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.62■□□□□ 0.57
PHTF2Q8N3S3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
PHTF2Q8N3S3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PHTF2Q8N3S3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.62■□□□□ 0.57
PHTF2Q8N3S3 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHTF2Q8N3S3 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHTF2Q8N3S3 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PHTF2Q8N3S3 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
PHTF2Q8N3S3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHTF2Q8N3S3 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.62■□□□□ 0.57
PHTF2Q8N3S3 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.62■□□□□ 0.57
PHTF2Q8N3S3 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PHTF2Q8N3S3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.62■□□□□ 0.57
PHTF2Q8N3S3 SLC25A6P4-201ENST00000586535 553 ntBASIC18.62■□□□□ 0.57
PHTF2Q8N3S3 AL121912.1-201ENST00000603683 238 ntBASIC18.62■□□□□ 0.57
PHTF2Q8N3S3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PHTF2Q8N3S3 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHTF2Q8N3S3 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHTF2Q8N3S3 MYLKP1-201ENST00000509077 1580 ntBASIC18.62■□□□□ 0.57
PHTF2Q8N3S3 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.62■□□□□ 0.57
PHTF2Q8N3S3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PHTF2Q8N3S3 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PHTF2Q8N3S3 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHTF2Q8N3S3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PHTF2Q8N3S3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHTF2Q8N3S3 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.62■□□□□ 0.57
PHTF2Q8N3S3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHTF2Q8N3S3 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.62■□□□□ 0.57
PHTF2Q8N3S3 FZD10-202ENST00000539839 3282 ntBASIC18.61■□□□□ 0.57
PHTF2Q8N3S3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PHTF2Q8N3S3 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PHTF2Q8N3S3 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PHTF2Q8N3S3 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms