Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.02■□□□□ 0.31
CCDC116Q8IYX3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC116Q8IYX3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.02■□□□□ 0.31
CCDC116Q8IYX3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
CCDC116Q8IYX3 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.02■□□□□ 0.31
CCDC116Q8IYX3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.02■□□□□ 0.31
CCDC116Q8IYX3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC116Q8IYX3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC116Q8IYX3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC116Q8IYX3 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC116Q8IYX3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC116Q8IYX3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC116Q8IYX3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC116Q8IYX3 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
CCDC116Q8IYX3 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC116Q8IYX3 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC116Q8IYX3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC116Q8IYX3 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.01■□□□□ 0.31
CCDC116Q8IYX3 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC116Q8IYX3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC116Q8IYX3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
CCDC116Q8IYX3 TMPOP1-202ENST00000424642 1267 ntBASIC17.01■□□□□ 0.31
CCDC116Q8IYX3 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC116Q8IYX3 HLA-F-220ENST00000434407 884 ntBASIC17.01■□□□□ 0.31
CCDC116Q8IYX3 AC112907.2-201ENST00000448639 330 ntBASIC17.01■□□□□ 0.31
CCDC116Q8IYX3 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC116Q8IYX3 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC116Q8IYX3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC116Q8IYX3 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CCDC116Q8IYX3 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CCDC116Q8IYX3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC116Q8IYX3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC116Q8IYX3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC116Q8IYX3 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC116Q8IYX3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC116Q8IYX3 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CCDC116Q8IYX3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CCDC116Q8IYX3 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC116Q8IYX3 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC116Q8IYX3 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC116Q8IYX3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
CCDC116Q8IYX3 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CCDC116Q8IYX3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC116Q8IYX3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17■□□□□ 0.31
CCDC116Q8IYX3 OR6D1P-202ENST00000641007 5290 ntBASIC17■□□□□ 0.31
CCDC116Q8IYX3 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
CCDC116Q8IYX3 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC116Q8IYX3 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC116Q8IYX3 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC116Q8IYX3 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CCDC116Q8IYX3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CCDC116Q8IYX3 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC116Q8IYX3 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC116Q8IYX3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC116Q8IYX3 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC116Q8IYX3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC116Q8IYX3 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CCDC116Q8IYX3 HES2-202ENST00000377836 507 ntTSL 2 BASIC17■□□□□ 0.31
CCDC116Q8IYX3 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC17■□□□□ 0.31
CCDC116Q8IYX3 KRT18P21-201ENST00000515767 1272 ntBASIC17■□□□□ 0.31
CCDC116Q8IYX3 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17■□□□□ 0.31
CCDC116Q8IYX3 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CCDC116Q8IYX3 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CCDC116Q8IYX3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17■□□□□ 0.31
CCDC116Q8IYX3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17■□□□□ 0.31
CCDC116Q8IYX3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17■□□□□ 0.31
CCDC116Q8IYX3 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC116Q8IYX3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC116Q8IYX3 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CCDC116Q8IYX3 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC116Q8IYX3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC116Q8IYX3 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
CCDC116Q8IYX3 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC116Q8IYX3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC116Q8IYX3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC116Q8IYX3 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC116Q8IYX3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC116Q8IYX3 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC116Q8IYX3 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC116Q8IYX3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CCDC116Q8IYX3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC116Q8IYX3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC116Q8IYX3 AC134043.2-201ENST00000624206 2238 ntBASIC16.99■□□□□ 0.31
CCDC116Q8IYX3 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC116Q8IYX3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC116Q8IYX3 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.99■□□□□ 0.31
CCDC116Q8IYX3 KRT18P48-201ENST00000434763 852 ntBASIC16.99■□□□□ 0.31
CCDC116Q8IYX3 SLC25A6P5-201ENST00000435663 894 ntBASIC16.99■□□□□ 0.31
CCDC116Q8IYX3 DUX4L26-201ENST00000489078 1255 ntBASIC16.99■□□□□ 0.31
CCDC116Q8IYX3 AC063952.2-201ENST00000498792 1227 ntBASIC16.99■□□□□ 0.31
CCDC116Q8IYX3 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC116Q8IYX3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC116Q8IYX3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.99■□□□□ 0.31
CCDC116Q8IYX3 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.99■□□□□ 0.31
CCDC116Q8IYX3 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC116Q8IYX3 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC116Q8IYX3 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.99■□□□□ 0.31
CCDC116Q8IYX3 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.99■□□□□ 0.31
CCDC116Q8IYX3 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.99■□□□□ 0.31
CCDC116Q8IYX3 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms