Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC71Q8IV32 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC71Q8IV32 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC71Q8IV32 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC71Q8IV32 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.92■□□□□ 0.3
CCDC71Q8IV32 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
CCDC71Q8IV32 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC71Q8IV32 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC71Q8IV32 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC71Q8IV32 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.92■□□□□ 0.3
CCDC71Q8IV32 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC71Q8IV32 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC71Q8IV32 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC71Q8IV32 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC71Q8IV32 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC71Q8IV32 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.92■□□□□ 0.3
CCDC71Q8IV32 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC71Q8IV32 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CCDC71Q8IV32 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC71Q8IV32 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC71Q8IV32 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC71Q8IV32 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC71Q8IV32 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC71Q8IV32 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC71Q8IV32 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC71Q8IV32 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC71Q8IV32 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC71Q8IV32 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC71Q8IV32 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC71Q8IV32 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC71Q8IV32 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC71Q8IV32 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC71Q8IV32 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC71Q8IV32 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.91■□□□□ 0.3
CCDC71Q8IV32 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.91■□□□□ 0.3
CCDC71Q8IV32 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC71Q8IV32 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.91■□□□□ 0.3
CCDC71Q8IV32 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
CCDC71Q8IV32 AC008622.2-201ENST00000617006 1229 ntBASIC16.91■□□□□ 0.3
CCDC71Q8IV32 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.91■□□□□ 0.3
CCDC71Q8IV32 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC71Q8IV32 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CCDC71Q8IV32 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC71Q8IV32 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CCDC71Q8IV32 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC71Q8IV32 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC71Q8IV32 AC005332.1-201ENST00000577698 1310 ntBASIC16.91■□□□□ 0.3
CCDC71Q8IV32 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC71Q8IV32 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC71Q8IV32 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC71Q8IV32 FLJ13224-201ENST00000313737 1514 ntBASIC16.91■□□□□ 0.3
CCDC71Q8IV32 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC71Q8IV32 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC71Q8IV32 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC71Q8IV32 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC71Q8IV32 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC71Q8IV32 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC71Q8IV32 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC71Q8IV32 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC71Q8IV32 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC71Q8IV32 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC71Q8IV32 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC71Q8IV32 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC71Q8IV32 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC71Q8IV32 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC71Q8IV32 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC71Q8IV32 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC71Q8IV32 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC71Q8IV32 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.9■□□□□ 0.3
CCDC71Q8IV32 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC71Q8IV32 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.9■□□□□ 0.3
CCDC71Q8IV32 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC71Q8IV32 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC71Q8IV32 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC71Q8IV32 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC71Q8IV32 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC71Q8IV32 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC71Q8IV32 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CCDC71Q8IV32 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC71Q8IV32 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC71Q8IV32 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC71Q8IV32 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC71Q8IV32 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC71Q8IV32 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC71Q8IV32 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC71Q8IV32 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC71Q8IV32 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC71Q8IV32 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC71Q8IV32 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC71Q8IV32 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.89■□□□□ 0.3
CCDC71Q8IV32 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
CCDC71Q8IV32 AC124067.4-201ENST00000519691 2379 ntBASIC16.89■□□□□ 0.3
CCDC71Q8IV32 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC71Q8IV32 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC71Q8IV32 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC71Q8IV32 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC71Q8IV32 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC71Q8IV32 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC71Q8IV32 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC71Q8IV32 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms