Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.34■□□□□ 0.85
SHC4Q6S5L8 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.34■□□□□ 0.85
SHC4Q6S5L8 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.34■□□□□ 0.85
SHC4Q6S5L8 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SHC4Q6S5L8 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.34■□□□□ 0.85
SHC4Q6S5L8 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHC4Q6S5L8 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
SHC4Q6S5L8 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.34■□□□□ 0.85
SHC4Q6S5L8 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SHC4Q6S5L8 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHC4Q6S5L8 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHC4Q6S5L8 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHC4Q6S5L8 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.34■□□□□ 0.85
SHC4Q6S5L8 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
SHC4Q6S5L8 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SHC4Q6S5L8 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.33■□□□□ 0.85
SHC4Q6S5L8 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SHC4Q6S5L8 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SHC4Q6S5L8 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SHC4Q6S5L8 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
SHC4Q6S5L8 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
SHC4Q6S5L8 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
SHC4Q6S5L8 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SHC4Q6S5L8 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SHC4Q6S5L8 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SHC4Q6S5L8 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SHC4Q6S5L8 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
SHC4Q6S5L8 AC034232.1-201ENST00000506026 1064 ntBASIC20.33■□□□□ 0.85
SHC4Q6S5L8 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.33■□□□□ 0.85
SHC4Q6S5L8 AC024563.2-201ENST00000603282 481 ntBASIC20.33■□□□□ 0.85
SHC4Q6S5L8 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC20.33■□□□□ 0.85
SHC4Q6S5L8 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SHC4Q6S5L8 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SHC4Q6S5L8 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SHC4Q6S5L8 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.33■□□□□ 0.84
SHC4Q6S5L8 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SHC4Q6S5L8 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SHC4Q6S5L8 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SHC4Q6S5L8 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.33■□□□□ 0.84
SHC4Q6S5L8 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.33■□□□□ 0.84
SHC4Q6S5L8 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SHC4Q6S5L8 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SHC4Q6S5L8 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SHC4Q6S5L8 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHC4Q6S5L8 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHC4Q6S5L8 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SHC4Q6S5L8 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SHC4Q6S5L8 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHC4Q6S5L8 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SHC4Q6S5L8 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SHC4Q6S5L8 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
SHC4Q6S5L8 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SHC4Q6S5L8 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SHC4Q6S5L8 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.32■□□□□ 0.84
SHC4Q6S5L8 COX11P1-201ENST00000489116 835 ntBASIC20.32■□□□□ 0.84
SHC4Q6S5L8 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.32■□□□□ 0.84
SHC4Q6S5L8 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SHC4Q6S5L8 AL136038.4-201ENST00000603606 1261 ntBASIC20.32■□□□□ 0.84
SHC4Q6S5L8 AC011558.1-201ENST00000623459 338 ntBASIC20.32■□□□□ 0.84
SHC4Q6S5L8 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.32■□□□□ 0.84
SHC4Q6S5L8 AC097493.4-201ENST00000641197 219 ntBASIC20.32■□□□□ 0.84
SHC4Q6S5L8 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHC4Q6S5L8 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SHC4Q6S5L8 AC073508.3-201ENST00000619697 1419 ntBASIC20.32■□□□□ 0.84
SHC4Q6S5L8 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHC4Q6S5L8 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SHC4Q6S5L8 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHC4Q6S5L8 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.32■□□□□ 0.84
SHC4Q6S5L8 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.32■□□□□ 0.84
SHC4Q6S5L8 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHC4Q6S5L8 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SHC4Q6S5L8 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHC4Q6S5L8 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHC4Q6S5L8 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHC4Q6S5L8 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SHC4Q6S5L8 KRT89P-201ENST00000620027 1478 ntBASIC20.31■□□□□ 0.84
SHC4Q6S5L8 AC022898.2-201ENST00000616822 1312 ntBASIC20.31■□□□□ 0.84
SHC4Q6S5L8 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHC4Q6S5L8 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHC4Q6S5L8 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SHC4Q6S5L8 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SHC4Q6S5L8 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.31■□□□□ 0.84
SHC4Q6S5L8 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.31■□□□□ 0.84
SHC4Q6S5L8 AC140113.3-201ENST00000605663 199 ntBASIC20.31■□□□□ 0.84
SHC4Q6S5L8 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
SHC4Q6S5L8 AC133561.5-201ENST00000635547 218 ntBASIC20.31■□□□□ 0.84
SHC4Q6S5L8 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHC4Q6S5L8 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHC4Q6S5L8 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.31■□□□□ 0.84
SHC4Q6S5L8 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
SHC4Q6S5L8 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SHC4Q6S5L8 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.31■□□□□ 0.84
SHC4Q6S5L8 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.31■□□□□ 0.84
SHC4Q6S5L8 SIRPAP1-201ENST00000448467 1770 ntBASIC20.31■□□□□ 0.84
SHC4Q6S5L8 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SHC4Q6S5L8 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.3■□□□□ 0.84
SHC4Q6S5L8 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SHC4Q6S5L8 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.3■□□□□ 0.84
SHC4Q6S5L8 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.3■□□□□ 0.84
SHC4Q6S5L8 AC009949.1-201ENST00000623048 1830 ntBASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms