Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
FAM78BQ5VT40 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
FAM78BQ5VT40 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC14.35□□□□□ -0.11
FAM78BQ5VT40 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC14.35□□□□□ -0.11
FAM78BQ5VT40 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
FAM78BQ5VT40 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC14.35□□□□□ -0.11
FAM78BQ5VT40 ADM-205ENST00000528544 586 ntTSL 2 BASIC14.35□□□□□ -0.11
FAM78BQ5VT40 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC14.35□□□□□ -0.11
FAM78BQ5VT40 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
FAM78BQ5VT40 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FAM78BQ5VT40 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FAM78BQ5VT40 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FAM78BQ5VT40 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FAM78BQ5VT40 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
FAM78BQ5VT40 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
FAM78BQ5VT40 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
FAM78BQ5VT40 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FAM78BQ5VT40 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FAM78BQ5VT40 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FAM78BQ5VT40 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
FAM78BQ5VT40 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FAM78BQ5VT40 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
FAM78BQ5VT40 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
FAM78BQ5VT40 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
FAM78BQ5VT40 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FAM78BQ5VT40 AL118508.1-201ENST00000613502 2345 ntBASIC14.34□□□□□ -0.11
FAM78BQ5VT40 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FAM78BQ5VT40 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FAM78BQ5VT40 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC14.34□□□□□ -0.11
FAM78BQ5VT40 KRASP1-201ENST00000407852 552 ntBASIC14.34□□□□□ -0.11
FAM78BQ5VT40 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
FAM78BQ5VT40 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC14.34□□□□□ -0.11
FAM78BQ5VT40 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC14.34□□□□□ -0.11
FAM78BQ5VT40 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
FAM78BQ5VT40 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC14.34□□□□□ -0.11
FAM78BQ5VT40 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.34□□□□□ -0.11
FAM78BQ5VT40 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC14.34□□□□□ -0.11
FAM78BQ5VT40 MNT-208ENST00000575394 606 ntTSL 4 BASIC14.34□□□□□ -0.11
FAM78BQ5VT40 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC14.34□□□□□ -0.11
FAM78BQ5VT40 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC14.34□□□□□ -0.11
FAM78BQ5VT40 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
FAM78BQ5VT40 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC14.34□□□□□ -0.11
FAM78BQ5VT40 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FAM78BQ5VT40 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
FAM78BQ5VT40 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FAM78BQ5VT40 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
FAM78BQ5VT40 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FAM78BQ5VT40 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
FAM78BQ5VT40 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
FAM78BQ5VT40 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FAM78BQ5VT40 NARF-204ENST00000390006 1766 ntTSL 2 BASIC14.34□□□□□ -0.11
FAM78BQ5VT40 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.34□□□□□ -0.11
FAM78BQ5VT40 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.34□□□□□ -0.11
FAM78BQ5VT40 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.34□□□□□ -0.11
FAM78BQ5VT40 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.34□□□□□ -0.11
FAM78BQ5VT40 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC14.34□□□□□ -0.11
FAM78BQ5VT40 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC14.34□□□□□ -0.11
FAM78BQ5VT40 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC14.34□□□□□ -0.11
FAM78BQ5VT40 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
FAM78BQ5VT40 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
FAM78BQ5VT40 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
FAM78BQ5VT40 HLA-DQB1-201ENST00000374943 1656 ntBASIC14.33□□□□□ -0.11
FAM78BQ5VT40 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
FAM78BQ5VT40 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
FAM78BQ5VT40 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
FAM78BQ5VT40 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.33□□□□□ -0.11
FAM78BQ5VT40 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FAM78BQ5VT40 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
FAM78BQ5VT40 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
FAM78BQ5VT40 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FAM78BQ5VT40 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FAM78BQ5VT40 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.33□□□□□ -0.12
FAM78BQ5VT40 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FAM78BQ5VT40 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FAM78BQ5VT40 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FAM78BQ5VT40 AC022211.2-201ENST00000585075 2527 ntBASIC14.33□□□□□ -0.12
FAM78BQ5VT40 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC14.33□□□□□ -0.12
FAM78BQ5VT40 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC14.33□□□□□ -0.12
FAM78BQ5VT40 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.33□□□□□ -0.12
FAM78BQ5VT40 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FAM78BQ5VT40 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FAM78BQ5VT40 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
FAM78BQ5VT40 DERL1-203ENST00000419562 918 ntTSL 2 BASIC14.33□□□□□ -0.12
FAM78BQ5VT40 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC14.33□□□□□ -0.12
FAM78BQ5VT40 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC14.33□□□□□ -0.12
FAM78BQ5VT40 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.33□□□□□ -0.12
FAM78BQ5VT40 PTPA-216ENST00000432651 857 ntTSL 2 BASIC14.33□□□□□ -0.12
FAM78BQ5VT40 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC14.33□□□□□ -0.12
FAM78BQ5VT40 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.33□□□□□ -0.12
FAM78BQ5VT40 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
FAM78BQ5VT40 LY6E-205ENST00000519611 635 ntTSL 3 BASIC14.33□□□□□ -0.12
FAM78BQ5VT40 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
FAM78BQ5VT40 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
FAM78BQ5VT40 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC14.33□□□□□ -0.12
FAM78BQ5VT40 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
FAM78BQ5VT40 MIR4651-201ENST00000582622 73 ntBASIC14.33□□□□□ -0.12
FAM78BQ5VT40 AC073648.6-201ENST00000641589 218 ntBASIC14.33□□□□□ -0.12
FAM78BQ5VT40 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
FAM78BQ5VT40 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
FAM78BQ5VT40 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms