Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC27.1■■□□□ 1.93
CDC42BPAQ5VT25 AC008667.4-201ENST00000607370 168 ntBASIC27.1■■□□□ 1.93
CDC42BPAQ5VT25 AC010654.1-201ENST00000615722 808 ntBASIC27.1■■□□□ 1.93
CDC42BPAQ5VT25 AC005593.1-201ENST00000624894 515 ntBASIC27.1■■□□□ 1.93
CDC42BPAQ5VT25 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CDC42BPAQ5VT25 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
CDC42BPAQ5VT25 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CDC42BPAQ5VT25 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CDC42BPAQ5VT25 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CDC42BPAQ5VT25 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
CDC42BPAQ5VT25 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC27.1■■□□□ 1.93
CDC42BPAQ5VT25 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
CDC42BPAQ5VT25 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC27.1■■□□□ 1.93
CDC42BPAQ5VT25 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
CDC42BPAQ5VT25 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CDC42BPAQ5VT25 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
CDC42BPAQ5VT25 HTR5BP-201ENST00000430851 1154 ntBASIC27.1■■□□□ 1.93
CDC42BPAQ5VT25 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC27.1■■□□□ 1.93
CDC42BPAQ5VT25 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC27.1■■□□□ 1.93
CDC42BPAQ5VT25 CYB561-217ENST00000582997 877 ntTSL 5 BASIC27.1■■□□□ 1.93
CDC42BPAQ5VT25 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC27.1■■□□□ 1.93
CDC42BPAQ5VT25 AC010507.1-201ENST00000633895 436 ntBASIC27.1■■□□□ 1.93
CDC42BPAQ5VT25 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
CDC42BPAQ5VT25 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CDC42BPAQ5VT25 AC022898.2-201ENST00000616822 1312 ntBASIC27.09■■□□□ 1.93
CDC42BPAQ5VT25 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC27.09■■□□□ 1.93
CDC42BPAQ5VT25 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
CDC42BPAQ5VT25 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
CDC42BPAQ5VT25 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC27.09■■□□□ 1.93
CDC42BPAQ5VT25 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC27.09■■□□□ 1.93
CDC42BPAQ5VT25 PON3-205ENST00000451904 1053 ntTSL 3 BASIC27.09■■□□□ 1.93
CDC42BPAQ5VT25 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC27.09■■□□□ 1.93
CDC42BPAQ5VT25 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC27.09■■□□□ 1.93
CDC42BPAQ5VT25 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC27.09■■□□□ 1.93
CDC42BPAQ5VT25 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
CDC42BPAQ5VT25 CROCCP3-202ENST00000420820 1947 ntBASIC27.09■■□□□ 1.93
CDC42BPAQ5VT25 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
CDC42BPAQ5VT25 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC27.09■■□□□ 1.93
CDC42BPAQ5VT25 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC27.08■■□□□ 1.93
CDC42BPAQ5VT25 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
CDC42BPAQ5VT25 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CDC42BPAQ5VT25 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CDC42BPAQ5VT25 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CDC42BPAQ5VT25 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC27.08■■□□□ 1.93
CDC42BPAQ5VT25 MIR4751-201ENST00000578027 74 ntBASIC27.08■■□□□ 1.93
CDC42BPAQ5VT25 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CDC42BPAQ5VT25 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC27.08■■□□□ 1.93
CDC42BPAQ5VT25 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CDC42BPAQ5VT25 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC27.08■■□□□ 1.93
CDC42BPAQ5VT25 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CDC42BPAQ5VT25 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC27.08■■□□□ 1.93
CDC42BPAQ5VT25 AC073592.3-201ENST00000625118 1834 ntBASIC27.08■■□□□ 1.93
CDC42BPAQ5VT25 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
CDC42BPAQ5VT25 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC27.08■■□□□ 1.93
CDC42BPAQ5VT25 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC27.07■■□□□ 1.92
CDC42BPAQ5VT25 CRYGEP-201ENST00000412192 528 ntBASIC27.07■■□□□ 1.92
CDC42BPAQ5VT25 AC254562.1-201ENST00000417586 456 ntBASIC27.07■■□□□ 1.92
CDC42BPAQ5VT25 AL020989.1-201ENST00000422979 469 ntBASIC27.07■■□□□ 1.92
CDC42BPAQ5VT25 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC27.07■■□□□ 1.92
CDC42BPAQ5VT25 CFL1-202ENST00000524553 860 ntTSL 2 BASIC27.07■■□□□ 1.92
CDC42BPAQ5VT25 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC27.07■■□□□ 1.92
CDC42BPAQ5VT25 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC27.07■■□□□ 1.92
CDC42BPAQ5VT25 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC27.07■■□□□ 1.92
CDC42BPAQ5VT25 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC27.07■■□□□ 1.92
CDC42BPAQ5VT25 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC27.07■■□□□ 1.92
CDC42BPAQ5VT25 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CDC42BPAQ5VT25 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CDC42BPAQ5VT25 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
CDC42BPAQ5VT25 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC27.07■■□□□ 1.92
CDC42BPAQ5VT25 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC27.07■■□□□ 1.92
CDC42BPAQ5VT25 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC27.07■■□□□ 1.92
CDC42BPAQ5VT25 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
CDC42BPAQ5VT25 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC27.07■■□□□ 1.92
CDC42BPAQ5VT25 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CDC42BPAQ5VT25 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC27.06■■□□□ 1.92
CDC42BPAQ5VT25 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC27.06■■□□□ 1.92
CDC42BPAQ5VT25 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CDC42BPAQ5VT25 LBH-203ENST00000404397 543 ntTSL 4 BASIC27.06■■□□□ 1.92
CDC42BPAQ5VT25 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC27.06■■□□□ 1.92
CDC42BPAQ5VT25 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC27.06■■□□□ 1.92
CDC42BPAQ5VT25 RPS15P9-201ENST00000494093 319 ntBASIC27.06■■□□□ 1.92
CDC42BPAQ5VT25 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC27.06■■□□□ 1.92
CDC42BPAQ5VT25 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC27.06■■□□□ 1.92
CDC42BPAQ5VT25 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC27.06■■□□□ 1.92
CDC42BPAQ5VT25 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CDC42BPAQ5VT25 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC27.06■■□□□ 1.92
CDC42BPAQ5VT25 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CDC42BPAQ5VT25 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
CDC42BPAQ5VT25 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CDC42BPAQ5VT25 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CDC42BPAQ5VT25 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CDC42BPAQ5VT25 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
CDC42BPAQ5VT25 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
CDC42BPAQ5VT25 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
CDC42BPAQ5VT25 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC27.05■■□□□ 1.92
CDC42BPAQ5VT25 S100A2-206ENST00000497140 697 ntTSL 2 BASIC27.05■■□□□ 1.92
CDC42BPAQ5VT25 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC27.05■■□□□ 1.92
CDC42BPAQ5VT25 AL078644.1-201ENST00000609881 752 ntBASIC27.05■■□□□ 1.92
CDC42BPAQ5VT25 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC27.05■■□□□ 1.92
CDC42BPAQ5VT25 AL049757.1-201ENST00000616842 1596 ntBASIC27.05■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms