Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TTC39AQ5SRH9 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
TTC39AQ5SRH9 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
TTC39AQ5SRH9 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.9■■□□□ 1.1
TTC39AQ5SRH9 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TTC39AQ5SRH9 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TTC39AQ5SRH9 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
TTC39AQ5SRH9 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
TTC39AQ5SRH9 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC21.9■■□□□ 1.1
TTC39AQ5SRH9 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TTC39AQ5SRH9 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
TTC39AQ5SRH9 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TTC39AQ5SRH9 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC21.9■■□□□ 1.1
TTC39AQ5SRH9 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TTC39AQ5SRH9 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
TTC39AQ5SRH9 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
TTC39AQ5SRH9 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TTC39AQ5SRH9 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
TTC39AQ5SRH9 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
TTC39AQ5SRH9 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TTC39AQ5SRH9 NUS1P2-201ENST00000417358 873 ntBASIC21.9■■□□□ 1.1
TTC39AQ5SRH9 TSPY19P-201ENST00000418461 509 ntBASIC21.9■■□□□ 1.1
TTC39AQ5SRH9 TSPY18P-201ENST00000441642 509 ntBASIC21.9■■□□□ 1.1
TTC39AQ5SRH9 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.9■■□□□ 1.1
TTC39AQ5SRH9 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.9■■□□□ 1.1
TTC39AQ5SRH9 DUTP2-201ENST00000519164 463 ntBASIC21.9■■□□□ 1.1
TTC39AQ5SRH9 IRF5-214ENST00000613821 595 ntTSL 5 BASIC21.9■■□□□ 1.1
TTC39AQ5SRH9 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC21.9■■□□□ 1.1
TTC39AQ5SRH9 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TTC39AQ5SRH9 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC21.9■■□□□ 1.1
TTC39AQ5SRH9 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TTC39AQ5SRH9 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TTC39AQ5SRH9 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TTC39AQ5SRH9 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TTC39AQ5SRH9 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.9■■□□□ 1.1
TTC39AQ5SRH9 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
TTC39AQ5SRH9 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TTC39AQ5SRH9 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
TTC39AQ5SRH9 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.89■■□□□ 1.1
TTC39AQ5SRH9 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.89■■□□□ 1.1
TTC39AQ5SRH9 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TTC39AQ5SRH9 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.1
TTC39AQ5SRH9 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TTC39AQ5SRH9 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC21.89■■□□□ 1.1
TTC39AQ5SRH9 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TTC39AQ5SRH9 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
TTC39AQ5SRH9 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TTC39AQ5SRH9 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TTC39AQ5SRH9 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
TTC39AQ5SRH9 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC21.89■■□□□ 1.09
TTC39AQ5SRH9 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC21.89■■□□□ 1.09
TTC39AQ5SRH9 KRT18P31-201ENST00000506277 1292 ntBASIC21.89■■□□□ 1.09
TTC39AQ5SRH9 AC096582.2-201ENST00000510860 516 ntBASIC21.89■■□□□ 1.09
TTC39AQ5SRH9 AC091304.2-201ENST00000564639 760 ntBASIC21.89■■□□□ 1.09
TTC39AQ5SRH9 BNIP3P18-201ENST00000593976 575 ntBASIC21.89■■□□□ 1.09
TTC39AQ5SRH9 CCNC-219ENST00000627680 896 ntTSL 5 BASIC21.89■■□□□ 1.09
TTC39AQ5SRH9 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TTC39AQ5SRH9 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TTC39AQ5SRH9 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TTC39AQ5SRH9 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.89■■□□□ 1.09
TTC39AQ5SRH9 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
TTC39AQ5SRH9 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
TTC39AQ5SRH9 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC21.89■■□□□ 1.09
TTC39AQ5SRH9 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TTC39AQ5SRH9 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TTC39AQ5SRH9 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
TTC39AQ5SRH9 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TTC39AQ5SRH9 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TTC39AQ5SRH9 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TTC39AQ5SRH9 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.88■■□□□ 1.09
TTC39AQ5SRH9 AC022898.2-201ENST00000616822 1312 ntBASIC21.88■■□□□ 1.09
TTC39AQ5SRH9 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TTC39AQ5SRH9 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
TTC39AQ5SRH9 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.88■■□□□ 1.09
TTC39AQ5SRH9 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TTC39AQ5SRH9 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
TTC39AQ5SRH9 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TTC39AQ5SRH9 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TTC39AQ5SRH9 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TTC39AQ5SRH9 FICD-205ENST00000552758 603 ntTSL 2 BASIC21.88■■□□□ 1.09
TTC39AQ5SRH9 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC21.88■■□□□ 1.09
TTC39AQ5SRH9 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
TTC39AQ5SRH9 TBCB-205ENST00000585746 875 ntTSL 3 BASIC21.88■■□□□ 1.09
TTC39AQ5SRH9 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC21.88■■□□□ 1.09
TTC39AQ5SRH9 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TTC39AQ5SRH9 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TTC39AQ5SRH9 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TTC39AQ5SRH9 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TTC39AQ5SRH9 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
TTC39AQ5SRH9 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
TTC39AQ5SRH9 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TTC39AQ5SRH9 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC21.87■■□□□ 1.09
TTC39AQ5SRH9 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TTC39AQ5SRH9 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TTC39AQ5SRH9 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
TTC39AQ5SRH9 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TTC39AQ5SRH9 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
TTC39AQ5SRH9 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
TTC39AQ5SRH9 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
TTC39AQ5SRH9 BCL2-203ENST00000589955 5011 ntBASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms