Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCSMST1Q4G0I0 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCSMST1Q4G0I0 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCSMST1Q4G0I0 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCSMST1Q4G0I0 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CCSMST1Q4G0I0 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCSMST1Q4G0I0 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCSMST1Q4G0I0 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.51■□□□□ 0.39
CCSMST1Q4G0I0 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.51■□□□□ 0.39
CCSMST1Q4G0I0 KRT18P65-201ENST00000439811 1286 ntBASIC17.51■□□□□ 0.39
CCSMST1Q4G0I0 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCSMST1Q4G0I0 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.51■□□□□ 0.39
CCSMST1Q4G0I0 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.51■□□□□ 0.39
CCSMST1Q4G0I0 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.51■□□□□ 0.39
CCSMST1Q4G0I0 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCSMST1Q4G0I0 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.51■□□□□ 0.39
CCSMST1Q4G0I0 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.51■□□□□ 0.39
CCSMST1Q4G0I0 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.51■□□□□ 0.39
CCSMST1Q4G0I0 AC067852.2-201ENST00000590513 2313 ntBASIC17.51■□□□□ 0.39
CCSMST1Q4G0I0 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.51■□□□□ 0.39
CCSMST1Q4G0I0 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.51■□□□□ 0.39
CCSMST1Q4G0I0 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCSMST1Q4G0I0 AC068880.1-201ENST00000507289 2297 ntBASIC17.51■□□□□ 0.39
CCSMST1Q4G0I0 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCSMST1Q4G0I0 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CCSMST1Q4G0I0 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCSMST1Q4G0I0 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCSMST1Q4G0I0 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CCSMST1Q4G0I0 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCSMST1Q4G0I0 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.5■□□□□ 0.39
CCSMST1Q4G0I0 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
CCSMST1Q4G0I0 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.5■□□□□ 0.39
CCSMST1Q4G0I0 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CCSMST1Q4G0I0 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
CCSMST1Q4G0I0 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.5■□□□□ 0.39
CCSMST1Q4G0I0 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.5■□□□□ 0.39
CCSMST1Q4G0I0 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.5■□□□□ 0.39
CCSMST1Q4G0I0 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCSMST1Q4G0I0 KRT8P26-201ENST00000534154 1276 ntBASIC17.5■□□□□ 0.39
CCSMST1Q4G0I0 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CCSMST1Q4G0I0 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCSMST1Q4G0I0 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.5■□□□□ 0.39
CCSMST1Q4G0I0 AC009154.2-201ENST00000621177 724 ntBASIC17.5■□□□□ 0.39
CCSMST1Q4G0I0 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.5■□□□□ 0.39
CCSMST1Q4G0I0 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CCSMST1Q4G0I0 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CCSMST1Q4G0I0 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCSMST1Q4G0I0 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.5■□□□□ 0.39
CCSMST1Q4G0I0 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCSMST1Q4G0I0 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.5■□□□□ 0.39
CCSMST1Q4G0I0 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.5■□□□□ 0.39
CCSMST1Q4G0I0 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.49■□□□□ 0.39
CCSMST1Q4G0I0 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCSMST1Q4G0I0 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCSMST1Q4G0I0 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CCSMST1Q4G0I0 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCSMST1Q4G0I0 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CCSMST1Q4G0I0 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.49■□□□□ 0.39
CCSMST1Q4G0I0 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCSMST1Q4G0I0 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCSMST1Q4G0I0 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCSMST1Q4G0I0 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCSMST1Q4G0I0 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCSMST1Q4G0I0 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CCSMST1Q4G0I0 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCSMST1Q4G0I0 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCSMST1Q4G0I0 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CCSMST1Q4G0I0 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.49■□□□□ 0.39
CCSMST1Q4G0I0 AC068472.1-201ENST00000474589 881 ntBASIC17.49■□□□□ 0.39
CCSMST1Q4G0I0 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
CCSMST1Q4G0I0 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCSMST1Q4G0I0 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CCSMST1Q4G0I0 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CCSMST1Q4G0I0 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCSMST1Q4G0I0 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCSMST1Q4G0I0 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCSMST1Q4G0I0 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCSMST1Q4G0I0 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCSMST1Q4G0I0 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CCSMST1Q4G0I0 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCSMST1Q4G0I0 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCSMST1Q4G0I0 NOC2LP2-201ENST00000407594 1944 ntBASIC17.49■□□□□ 0.39
CCSMST1Q4G0I0 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CCSMST1Q4G0I0 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCSMST1Q4G0I0 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCSMST1Q4G0I0 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCSMST1Q4G0I0 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCSMST1Q4G0I0 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCSMST1Q4G0I0 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CCSMST1Q4G0I0 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCSMST1Q4G0I0 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CCSMST1Q4G0I0 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCSMST1Q4G0I0 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.48■□□□□ 0.39
CCSMST1Q4G0I0 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCSMST1Q4G0I0 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCSMST1Q4G0I0 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCSMST1Q4G0I0 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.48■□□□□ 0.39
CCSMST1Q4G0I0 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCSMST1Q4G0I0 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCSMST1Q4G0I0 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms