Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
KCNA1Q09470 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KCNA1Q09470 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.82■□□□□ 0.76
KCNA1Q09470 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
KCNA1Q09470 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
KCNA1Q09470 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.82■□□□□ 0.76
KCNA1Q09470 AC005332.8-201ENST00000622750 2735 ntBASIC19.82■□□□□ 0.76
KCNA1Q09470 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.81■□□□□ 0.76
KCNA1Q09470 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KCNA1Q09470 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
KCNA1Q09470 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
KCNA1Q09470 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
KCNA1Q09470 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
KCNA1Q09470 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.81■□□□□ 0.76
KCNA1Q09470 DUTP2-201ENST00000519164 463 ntBASIC19.81■□□□□ 0.76
KCNA1Q09470 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.81■□□□□ 0.76
KCNA1Q09470 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.81■□□□□ 0.76
KCNA1Q09470 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
KCNA1Q09470 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.81■□□□□ 0.76
KCNA1Q09470 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
KCNA1Q09470 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.81■□□□□ 0.76
KCNA1Q09470 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KCNA1Q09470 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
KCNA1Q09470 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
KCNA1Q09470 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
KCNA1Q09470 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.81■□□□□ 0.76
KCNA1Q09470 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KCNA1Q09470 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
KCNA1Q09470 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
KCNA1Q09470 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
KCNA1Q09470 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
KCNA1Q09470 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KCNA1Q09470 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
KCNA1Q09470 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.8■□□□□ 0.76
KCNA1Q09470 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KCNA1Q09470 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.8■□□□□ 0.76
KCNA1Q09470 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
KCNA1Q09470 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KCNA1Q09470 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
KCNA1Q09470 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
KCNA1Q09470 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KCNA1Q09470 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
KCNA1Q09470 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KCNA1Q09470 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.8■□□□□ 0.76
KCNA1Q09470 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KCNA1Q09470 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.8■□□□□ 0.76
KCNA1Q09470 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
KCNA1Q09470 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.8■□□□□ 0.76
KCNA1Q09470 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
KCNA1Q09470 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
KCNA1Q09470 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KCNA1Q09470 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KCNA1Q09470 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KCNA1Q09470 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.8■□□□□ 0.76
KCNA1Q09470 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KCNA1Q09470 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KCNA1Q09470 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
KCNA1Q09470 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
KCNA1Q09470 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
KCNA1Q09470 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KCNA1Q09470 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
KCNA1Q09470 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.79■□□□□ 0.76
KCNA1Q09470 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KCNA1Q09470 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KCNA1Q09470 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.79■□□□□ 0.76
KCNA1Q09470 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
KCNA1Q09470 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.79■□□□□ 0.76
KCNA1Q09470 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KCNA1Q09470 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KCNA1Q09470 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KCNA1Q09470 AC012317.2-201ENST00000623305 2251 ntBASIC19.79■□□□□ 0.76
KCNA1Q09470 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KCNA1Q09470 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
KCNA1Q09470 IER3-202ENST00000376377 1350 ntBASIC19.79■□□□□ 0.76
KCNA1Q09470 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KCNA1Q09470 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KCNA1Q09470 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KCNA1Q09470 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
KCNA1Q09470 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KCNA1Q09470 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KCNA1Q09470 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KCNA1Q09470 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.78■□□□□ 0.76
KCNA1Q09470 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KCNA1Q09470 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
KCNA1Q09470 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KCNA1Q09470 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.78■□□□□ 0.76
KCNA1Q09470 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.78■□□□□ 0.76
KCNA1Q09470 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.78■□□□□ 0.76
KCNA1Q09470 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.78■□□□□ 0.76
KCNA1Q09470 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.78■□□□□ 0.76
KCNA1Q09470 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
KCNA1Q09470 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KCNA1Q09470 AC016734.2-201ENST00000624325 1377 ntBASIC19.78■□□□□ 0.76
KCNA1Q09470 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KCNA1Q09470 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
KCNA1Q09470 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KCNA1Q09470 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KCNA1Q09470 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.78■□□□□ 0.76
KCNA1Q09470 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KCNA1Q09470 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms