Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDR2Q01850 STARP1-201ENST00000397973 869 ntBASIC19.24■□□□□ 0.67
CDR2Q01850 AC117947.1-201ENST00000427448 529 ntBASIC19.24■□□□□ 0.67
CDR2Q01850 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.24■□□□□ 0.67
CDR2Q01850 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.24■□□□□ 0.67
CDR2Q01850 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.24■□□□□ 0.67
CDR2Q01850 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
CDR2Q01850 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.24■□□□□ 0.67
CDR2Q01850 AC024563.2-201ENST00000603282 481 ntBASIC19.24■□□□□ 0.67
CDR2Q01850 AL136038.4-201ENST00000603606 1261 ntBASIC19.24■□□□□ 0.67
CDR2Q01850 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.24■□□□□ 0.67
CDR2Q01850 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDR2Q01850 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.24■□□□□ 0.67
CDR2Q01850 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDR2Q01850 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CDR2Q01850 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDR2Q01850 LINC00602-201ENST00000629776 2065 ntBASIC19.24■□□□□ 0.67
CDR2Q01850 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDR2Q01850 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDR2Q01850 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDR2Q01850 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDR2Q01850 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.24■□□□□ 0.67
CDR2Q01850 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDR2Q01850 LINC00896-202ENST00000609602 2128 ntBASIC19.24■□□□□ 0.67
CDR2Q01850 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDR2Q01850 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.24■□□□□ 0.67
CDR2Q01850 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDR2Q01850 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.23■□□□□ 0.67
CDR2Q01850 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDR2Q01850 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CDR2Q01850 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDR2Q01850 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CDR2Q01850 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDR2Q01850 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDR2Q01850 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CDR2Q01850 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.23■□□□□ 0.67
CDR2Q01850 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDR2Q01850 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.23■□□□□ 0.67
CDR2Q01850 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.23■□□□□ 0.67
CDR2Q01850 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
CDR2Q01850 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.23■□□□□ 0.67
CDR2Q01850 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.23■□□□□ 0.67
CDR2Q01850 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.23■□□□□ 0.67
CDR2Q01850 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
CDR2Q01850 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDR2Q01850 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDR2Q01850 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDR2Q01850 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDR2Q01850 FZD10-202ENST00000539839 3282 ntBASIC19.23■□□□□ 0.67
CDR2Q01850 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDR2Q01850 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CDR2Q01850 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDR2Q01850 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDR2Q01850 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CDR2Q01850 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.23■□□□□ 0.67
CDR2Q01850 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.22■□□□□ 0.67
CDR2Q01850 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDR2Q01850 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDR2Q01850 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.22■□□□□ 0.67
CDR2Q01850 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDR2Q01850 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDR2Q01850 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.22■□□□□ 0.67
CDR2Q01850 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDR2Q01850 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDR2Q01850 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.22■□□□□ 0.67
CDR2Q01850 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDR2Q01850 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDR2Q01850 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.22■□□□□ 0.67
CDR2Q01850 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDR2Q01850 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.22■□□□□ 0.67
CDR2Q01850 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
CDR2Q01850 HLA-F-220ENST00000434407 884 ntBASIC19.22■□□□□ 0.67
CDR2Q01850 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDR2Q01850 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.22■□□□□ 0.67
CDR2Q01850 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDR2Q01850 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.22■□□□□ 0.67
CDR2Q01850 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDR2Q01850 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.22■□□□□ 0.67
CDR2Q01850 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.22■□□□□ 0.67
CDR2Q01850 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CDR2Q01850 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CDR2Q01850 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDR2Q01850 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDR2Q01850 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.22■□□□□ 0.67
CDR2Q01850 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDR2Q01850 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
CDR2Q01850 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDR2Q01850 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDR2Q01850 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDR2Q01850 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.21■□□□□ 0.67
CDR2Q01850 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CDR2Q01850 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.21■□□□□ 0.67
CDR2Q01850 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CDR2Q01850 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDR2Q01850 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CDR2Q01850 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.21■□□□□ 0.67
CDR2Q01850 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDR2Q01850 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDR2Q01850 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDR2Q01850 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms