Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEP78395 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.21■□□□□ 0.51
PRAMEP78395 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.21■□□□□ 0.51
PRAMEP78395 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.21■□□□□ 0.51
PRAMEP78395 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.21■□□□□ 0.51
PRAMEP78395 AC068880.1-201ENST00000507289 2297 ntBASIC18.21■□□□□ 0.51
PRAMEP78395 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEP78395 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEP78395 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEP78395 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEP78395 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEP78395 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEP78395 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PRAMEP78395 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.21■□□□□ 0.51
PRAMEP78395 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEP78395 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
PRAMEP78395 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEP78395 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PRAMEP78395 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.2■□□□□ 0.5
PRAMEP78395 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEP78395 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEP78395 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PRAMEP78395 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEP78395 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEP78395 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PRAMEP78395 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEP78395 AC020916.1-201ENST00000587762 1774 ntBASIC18.2■□□□□ 0.5
PRAMEP78395 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEP78395 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEP78395 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.2■□□□□ 0.5
PRAMEP78395 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.2■□□□□ 0.5
PRAMEP78395 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEP78395 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PRAMEP78395 TERF1P1-201ENST00000311003 1181 ntBASIC18.2■□□□□ 0.5
PRAMEP78395 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
PRAMEP78395 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.2■□□□□ 0.5
PRAMEP78395 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.2■□□□□ 0.5
PRAMEP78395 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEP78395 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEP78395 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEP78395 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEP78395 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.2■□□□□ 0.5
PRAMEP78395 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.2■□□□□ 0.5
PRAMEP78395 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEP78395 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEP78395 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
PRAMEP78395 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.2■□□□□ 0.5
PRAMEP78395 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEP78395 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.2■□□□□ 0.5
PRAMEP78395 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEP78395 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEP78395 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEP78395 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
PRAMEP78395 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEP78395 AC008764.6-201ENST00000595909 2069 ntBASIC18.19■□□□□ 0.5
PRAMEP78395 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEP78395 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEP78395 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEP78395 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEP78395 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.19■□□□□ 0.5
PRAMEP78395 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.19■□□□□ 0.5
PRAMEP78395 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PRAMEP78395 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PRAMEP78395 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEP78395 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEP78395 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PRAMEP78395 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEP78395 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PRAMEP78395 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.19■□□□□ 0.5
PRAMEP78395 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEP78395 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.19■□□□□ 0.5
PRAMEP78395 BX664615.1-201ENST00000443558 458 ntBASIC18.19■□□□□ 0.5
PRAMEP78395 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
PRAMEP78395 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.19■□□□□ 0.5
PRAMEP78395 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEP78395 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.19■□□□□ 0.5
PRAMEP78395 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
PRAMEP78395 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEP78395 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
PRAMEP78395 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEP78395 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEP78395 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEP78395 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.19■□□□□ 0.5
PRAMEP78395 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.19■□□□□ 0.5
PRAMEP78395 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEP78395 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.19■□□□□ 0.5
PRAMEP78395 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.19■□□□□ 0.5
PRAMEP78395 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.19■□□□□ 0.5
PRAMEP78395 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEP78395 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEP78395 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEP78395 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PRAMEP78395 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEP78395 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PRAMEP78395 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
PRAMEP78395 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEP78395 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEP78395 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.18■□□□□ 0.5
PRAMEP78395 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEP78395 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms