Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.3■□□□□ 0.2
RPS4XP62701 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPS4XP62701 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RPS4XP62701 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPS4XP62701 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RPS4XP62701 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPS4XP62701 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.29■□□□□ 0.2
RPS4XP62701 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPS4XP62701 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RPS4XP62701 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS4XP62701 LINC00167-201ENST00000530583 1419 ntBASIC16.29■□□□□ 0.2
RPS4XP62701 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.29■□□□□ 0.2
RPS4XP62701 IER3-202ENST00000376377 1350 ntBASIC16.29■□□□□ 0.2
RPS4XP62701 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.29■□□□□ 0.2
RPS4XP62701 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS4XP62701 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS4XP62701 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
RPS4XP62701 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS4XP62701 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS4XP62701 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS4XP62701 PCED1CP-201ENST00000419887 785 ntBASIC16.29■□□□□ 0.2
RPS4XP62701 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPS4XP62701 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.29■□□□□ 0.2
RPS4XP62701 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.29■□□□□ 0.2
RPS4XP62701 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.29■□□□□ 0.2
RPS4XP62701 AL441883.1-201ENST00000566170 1045 ntBASIC16.29■□□□□ 0.2
RPS4XP62701 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS4XP62701 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.29■□□□□ 0.2
RPS4XP62701 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.29■□□□□ 0.2
RPS4XP62701 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.29■□□□□ 0.2
RPS4XP62701 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS4XP62701 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS4XP62701 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.29■□□□□ 0.2
RPS4XP62701 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS4XP62701 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS4XP62701 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RPS4XP62701 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS4XP62701 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS4XP62701 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS4XP62701 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.29■□□□□ 0.2
RPS4XP62701 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RPS4XP62701 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
RPS4XP62701 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.29■□□□□ 0.2
RPS4XP62701 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RPS4XP62701 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.29■□□□□ 0.2
RPS4XP62701 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.28■□□□□ 0.2
RPS4XP62701 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RPS4XP62701 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RPS4XP62701 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RPS4XP62701 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.28■□□□□ 0.2
RPS4XP62701 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS4XP62701 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
RPS4XP62701 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS4XP62701 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS4XP62701 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.28■□□□□ 0.2
RPS4XP62701 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS4XP62701 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RPS4XP62701 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RPS4XP62701 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS4XP62701 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS4XP62701 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.28■□□□□ 0.2
RPS4XP62701 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS4XP62701 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RPS4XP62701 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RPS4XP62701 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.28■□□□□ 0.2
RPS4XP62701 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.28■□□□□ 0.2
RPS4XP62701 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.28■□□□□ 0.2
RPS4XP62701 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.28■□□□□ 0.2
RPS4XP62701 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.28■□□□□ 0.2
RPS4XP62701 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RPS4XP62701 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS4XP62701 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
RPS4XP62701 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS4XP62701 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
RPS4XP62701 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RPS4XP62701 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RPS4XP62701 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS4XP62701 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RPS4XP62701 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RPS4XP62701 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.28■□□□□ 0.2
RPS4XP62701 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RPS4XP62701 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RPS4XP62701 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS4XP62701 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS4XP62701 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RPS4XP62701 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS4XP62701 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPS4XP62701 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPS4XP62701 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPS4XP62701 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPS4XP62701 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
RPS4XP62701 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPS4XP62701 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPS4XP62701 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPS4XP62701 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RPS4XP62701 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPS4XP62701 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RPS4XP62701 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.27■□□□□ 0.2
RPS4XP62701 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.27■□□□□ 0.2
RPS4XP62701 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms