Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH15P55291 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH15P55291 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH15P55291 KRT8P45-201ENST00000414328 1447 ntBASIC16.85■□□□□ 0.29
CDH15P55291 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDH15P55291 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CDH15P55291 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH15P55291 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.85■□□□□ 0.29
CDH15P55291 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH15P55291 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH15P55291 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH15P55291 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.85■□□□□ 0.29
CDH15P55291 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.85■□□□□ 0.29
CDH15P55291 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.84■□□□□ 0.29
CDH15P55291 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH15P55291 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH15P55291 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH15P55291 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH15P55291 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH15P55291 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.84■□□□□ 0.29
CDH15P55291 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
CDH15P55291 PCDHA14-201ENST00000506751 2298 ntBASIC16.84■□□□□ 0.29
CDH15P55291 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH15P55291 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH15P55291 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH15P55291 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CDH15P55291 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.84■□□□□ 0.29
CDH15P55291 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CDH15P55291 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH15P55291 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.84■□□□□ 0.29
CDH15P55291 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH15P55291 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CDH15P55291 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.84■□□□□ 0.29
CDH15P55291 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CDH15P55291 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.84■□□□□ 0.29
CDH15P55291 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.84■□□□□ 0.29
CDH15P55291 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CDH15P55291 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH15P55291 DOC2GP-204ENST00000639052 2548 ntBASIC16.84■□□□□ 0.29
CDH15P55291 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDH15P55291 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDH15P55291 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDH15P55291 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDH15P55291 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDH15P55291 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDH15P55291 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH15P55291 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH15P55291 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH15P55291 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH15P55291 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH15P55291 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH15P55291 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.83■□□□□ 0.28
CDH15P55291 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
CDH15P55291 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH15P55291 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
CDH15P55291 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH15P55291 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.83■□□□□ 0.28
CDH15P55291 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.83■□□□□ 0.28
CDH15P55291 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.83■□□□□ 0.28
CDH15P55291 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CDH15P55291 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH15P55291 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH15P55291 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.83■□□□□ 0.28
CDH15P55291 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.83■□□□□ 0.28
CDH15P55291 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.83■□□□□ 0.28
CDH15P55291 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH15P55291 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.83■□□□□ 0.28
CDH15P55291 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH15P55291 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH15P55291 Z99916.2-201ENST00000604037 246 ntBASIC16.83■□□□□ 0.28
CDH15P55291 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH15P55291 AL357033.4-201ENST00000617703 1807 ntBASIC16.83■□□□□ 0.28
CDH15P55291 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.83■□□□□ 0.28
CDH15P55291 AC106886.4-201ENST00000623557 2502 ntBASIC16.83■□□□□ 0.28
CDH15P55291 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH15P55291 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.28
CDH15P55291 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH15P55291 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CDH15P55291 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH15P55291 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH15P55291 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH15P55291 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH15P55291 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CDH15P55291 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH15P55291 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH15P55291 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH15P55291 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH15P55291 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH15P55291 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH15P55291 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CDH15P55291 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH15P55291 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CDH15P55291 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH15P55291 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CDH15P55291 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH15P55291 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH15P55291 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.82■□□□□ 0.28
CDH15P55291 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH15P55291 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CDH15P55291 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms