Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.66■□□□□ 0.42
CDH13P55290 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH13P55290 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH13P55290 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CDH13P55290 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH13P55290 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH13P55290 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH13P55290 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH13P55290 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH13P55290 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.66■□□□□ 0.42
CDH13P55290 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CDH13P55290 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH13P55290 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH13P55290 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CDH13P55290 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH13P55290 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CDH13P55290 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CDH13P55290 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
CDH13P55290 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.65■□□□□ 0.42
CDH13P55290 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.65■□□□□ 0.42
CDH13P55290 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH13P55290 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH13P55290 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH13P55290 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH13P55290 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH13P55290 AC132938.6-201ENST00000623828 1655 ntBASIC17.65■□□□□ 0.42
CDH13P55290 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH13P55290 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CDH13P55290 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH13P55290 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH13P55290 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDH13P55290 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH13P55290 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CDH13P55290 AC128688.1-201ENST00000487626 519 ntBASIC17.65■□□□□ 0.42
CDH13P55290 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
CDH13P55290 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.65■□□□□ 0.42
CDH13P55290 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.65■□□□□ 0.42
CDH13P55290 NAPSB-206ENST00000562112 1266 ntBASIC17.65■□□□□ 0.42
CDH13P55290 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.65■□□□□ 0.42
CDH13P55290 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
CDH13P55290 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CDH13P55290 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CDH13P55290 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH13P55290 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDH13P55290 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CDH13P55290 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.65■□□□□ 0.42
CDH13P55290 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH13P55290 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH13P55290 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.65■□□□□ 0.42
CDH13P55290 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH13P55290 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH13P55290 AL645608.8-201ENST00000606034 2086 ntBASIC17.65■□□□□ 0.42
CDH13P55290 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.65■□□□□ 0.42
CDH13P55290 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CDH13P55290 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CDH13P55290 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
CDH13P55290 AC100803.2-201ENST00000562459 1963 ntBASIC17.64■□□□□ 0.41
CDH13P55290 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH13P55290 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDH13P55290 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH13P55290 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH13P55290 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDH13P55290 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDH13P55290 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CDH13P55290 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDH13P55290 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH13P55290 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.64■□□□□ 0.41
CDH13P55290 ECEL1P2-202ENST00000465689 757 ntBASIC17.64■□□□□ 0.41
CDH13P55290 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH13P55290 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CDH13P55290 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDH13P55290 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.64■□□□□ 0.41
CDH13P55290 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CDH13P55290 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CDH13P55290 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CDH13P55290 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH13P55290 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH13P55290 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDH13P55290 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH13P55290 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH13P55290 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH13P55290 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDH13P55290 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.64■□□□□ 0.41
CDH13P55290 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH13P55290 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH13P55290 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH13P55290 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH13P55290 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDH13P55290 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CDH13P55290 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH13P55290 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH13P55290 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH13P55290 MMP23A-201ENST00000234610 1017 ntBASIC17.63■□□□□ 0.41
CDH13P55290 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.63■□□□□ 0.41
CDH13P55290 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH13P55290 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.63■□□□□ 0.41
CDH13P55290 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH13P55290 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CDH13P55290 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CDH13P55290 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms