Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NCKAP1LP55160 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCKAP1LP55160 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.72■□□□□ 0.75
NCKAP1LP55160 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
NCKAP1LP55160 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCKAP1LP55160 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCKAP1LP55160 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
NCKAP1LP55160 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.72■□□□□ 0.75
NCKAP1LP55160 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCKAP1LP55160 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
NCKAP1LP55160 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.72■□□□□ 0.75
NCKAP1LP55160 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCKAP1LP55160 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.72■□□□□ 0.75
NCKAP1LP55160 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.72■□□□□ 0.75
NCKAP1LP55160 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.72■□□□□ 0.75
NCKAP1LP55160 AC092329.2-201ENST00000598402 547 ntBASIC19.72■□□□□ 0.75
NCKAP1LP55160 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCKAP1LP55160 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.72■□□□□ 0.75
NCKAP1LP55160 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
NCKAP1LP55160 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCKAP1LP55160 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.72■□□□□ 0.75
NCKAP1LP55160 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.72■□□□□ 0.75
NCKAP1LP55160 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCKAP1LP55160 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
NCKAP1LP55160 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NCKAP1LP55160 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCKAP1LP55160 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCKAP1LP55160 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.71■□□□□ 0.75
NCKAP1LP55160 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCKAP1LP55160 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCKAP1LP55160 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
NCKAP1LP55160 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCKAP1LP55160 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NCKAP1LP55160 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NCKAP1LP55160 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCKAP1LP55160 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCKAP1LP55160 LINC00265-3P-201ENST00000447588 903 ntBASIC19.71■□□□□ 0.75
NCKAP1LP55160 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.71■□□□□ 0.75
NCKAP1LP55160 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
NCKAP1LP55160 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.71■□□□□ 0.75
NCKAP1LP55160 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.71■□□□□ 0.75
NCKAP1LP55160 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCKAP1LP55160 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NCKAP1LP55160 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NCKAP1LP55160 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCKAP1LP55160 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCKAP1LP55160 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCKAP1LP55160 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.71■□□□□ 0.75
NCKAP1LP55160 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NCKAP1LP55160 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.71■□□□□ 0.75
NCKAP1LP55160 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.71■□□□□ 0.74
NCKAP1LP55160 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NCKAP1LP55160 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NCKAP1LP55160 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NCKAP1LP55160 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NCKAP1LP55160 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NCKAP1LP55160 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NCKAP1LP55160 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NCKAP1LP55160 AIRN-201ENST00000601203 4374 ntBASIC19.7■□□□□ 0.74
NCKAP1LP55160 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NCKAP1LP55160 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
NCKAP1LP55160 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NCKAP1LP55160 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NCKAP1LP55160 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
NCKAP1LP55160 SLC25A6P5-201ENST00000435663 894 ntBASIC19.7■□□□□ 0.74
NCKAP1LP55160 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.7■□□□□ 0.74
NCKAP1LP55160 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.7■□□□□ 0.74
NCKAP1LP55160 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
NCKAP1LP55160 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.7■□□□□ 0.74
NCKAP1LP55160 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.7■□□□□ 0.74
NCKAP1LP55160 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.7■□□□□ 0.74
NCKAP1LP55160 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.7■□□□□ 0.74
NCKAP1LP55160 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NCKAP1LP55160 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NCKAP1LP55160 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NCKAP1LP55160 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NCKAP1LP55160 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.69■□□□□ 0.74
NCKAP1LP55160 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NCKAP1LP55160 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NCKAP1LP55160 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.69■□□□□ 0.74
NCKAP1LP55160 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NCKAP1LP55160 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NCKAP1LP55160 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
NCKAP1LP55160 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NCKAP1LP55160 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NCKAP1LP55160 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NCKAP1LP55160 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
NCKAP1LP55160 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
NCKAP1LP55160 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NCKAP1LP55160 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NCKAP1LP55160 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NCKAP1LP55160 HCG4P8-203ENST00000443049 980 ntBASIC19.69■□□□□ 0.74
NCKAP1LP55160 VENTXP7-201ENST00000475503 772 ntBASIC19.69■□□□□ 0.74
NCKAP1LP55160 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.69■□□□□ 0.74
NCKAP1LP55160 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NCKAP1LP55160 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.69■□□□□ 0.74
NCKAP1LP55160 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.69■□□□□ 0.74
NCKAP1LP55160 Z69720.1-201ENST00000601483 472 ntBASIC19.69■□□□□ 0.74
NCKAP1LP55160 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.69■□□□□ 0.74
NCKAP1LP55160 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms