Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDX1P52945 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.5■□□□□ 0.39
PDX1P52945 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.5■□□□□ 0.39
PDX1P52945 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.49■□□□□ 0.39
PDX1P52945 IL9RP2-201ENST00000423948 1312 ntBASIC17.49■□□□□ 0.39
PDX1P52945 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDX1P52945 AC009113.1-201ENST00000570267 2443 ntBASIC17.49■□□□□ 0.39
PDX1P52945 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PDX1P52945 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.49■□□□□ 0.39
PDX1P52945 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDX1P52945 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDX1P52945 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PDX1P52945 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PDX1P52945 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDX1P52945 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PDX1P52945 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDX1P52945 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PDX1P52945 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
PDX1P52945 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDX1P52945 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDX1P52945 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.49■□□□□ 0.39
PDX1P52945 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.49■□□□□ 0.39
PDX1P52945 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDX1P52945 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.49■□□□□ 0.39
PDX1P52945 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.49■□□□□ 0.39
PDX1P52945 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.49■□□□□ 0.39
PDX1P52945 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.49■□□□□ 0.39
PDX1P52945 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDX1P52945 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PDX1P52945 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.49■□□□□ 0.39
PDX1P52945 MIR5100-201ENST00000579544 119 ntBASIC17.49■□□□□ 0.39
PDX1P52945 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.49■□□□□ 0.39
PDX1P52945 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PDX1P52945 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDX1P52945 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDX1P52945 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDX1P52945 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDX1P52945 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.49■□□□□ 0.39
PDX1P52945 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDX1P52945 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PDX1P52945 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDX1P52945 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.49■□□□□ 0.39
PDX1P52945 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDX1P52945 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.49■□□□□ 0.39
PDX1P52945 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.49■□□□□ 0.39
PDX1P52945 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.49■□□□□ 0.39
PDX1P52945 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDX1P52945 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PDX1P52945 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDX1P52945 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDX1P52945 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PDX1P52945 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PDX1P52945 KRT18P67-201ENST00000432816 1264 ntBASIC17.48■□□□□ 0.39
PDX1P52945 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PDX1P52945 FAM197Y8-203ENST00000450145 560 ntBASIC17.48■□□□□ 0.39
PDX1P52945 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PDX1P52945 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.48■□□□□ 0.39
PDX1P52945 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.48■□□□□ 0.39
PDX1P52945 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.48■□□□□ 0.39
PDX1P52945 AC005336.2-201ENST00000593183 939 ntBASIC17.48■□□□□ 0.39
PDX1P52945 AC064862.7-201ENST00000604520 867 ntBASIC17.48■□□□□ 0.39
PDX1P52945 AL591684.3-201ENST00000605187 298 ntBASIC17.48■□□□□ 0.39
PDX1P52945 AF228730.7-201ENST00000641842 219 ntBASIC17.48■□□□□ 0.39
PDX1P52945 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.48■□□□□ 0.39
PDX1P52945 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDX1P52945 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDX1P52945 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDX1P52945 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.48■□□□□ 0.39
PDX1P52945 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDX1P52945 AC099343.3-201ENST00000605834 2503 ntBASIC17.48■□□□□ 0.39
PDX1P52945 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.48■□□□□ 0.39
PDX1P52945 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDX1P52945 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.48■□□□□ 0.39
PDX1P52945 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.47■□□□□ 0.39
PDX1P52945 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDX1P52945 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDX1P52945 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PDX1P52945 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PDX1P52945 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDX1P52945 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDX1P52945 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PDX1P52945 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDX1P52945 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDX1P52945 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDX1P52945 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PDX1P52945 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDX1P52945 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.47■□□□□ 0.39
PDX1P52945 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.47■□□□□ 0.39
PDX1P52945 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDX1P52945 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDX1P52945 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PDX1P52945 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.47■□□□□ 0.39
PDX1P52945 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDX1P52945 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDX1P52945 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.47■□□□□ 0.39
PDX1P52945 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.47■□□□□ 0.39
PDX1P52945 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDX1P52945 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PDX1P52945 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.47■□□□□ 0.39
PDX1P52945 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms