Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
GTF2A1P52655 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.72■□□□□ 0.43
GTF2A1P52655 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
GTF2A1P52655 IRS3P-201ENST00000223076 1006 ntBASIC17.72■□□□□ 0.43
GTF2A1P52655 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GTF2A1P52655 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GTF2A1P52655 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.72■□□□□ 0.43
GTF2A1P52655 AC104187.1-201ENST00000607510 612 ntBASIC17.72■□□□□ 0.43
GTF2A1P52655 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GTF2A1P52655 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.72■□□□□ 0.43
GTF2A1P52655 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GTF2A1P52655 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GTF2A1P52655 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
GTF2A1P52655 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.72■□□□□ 0.43
GTF2A1P52655 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GTF2A1P52655 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GTF2A1P52655 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
GTF2A1P52655 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GTF2A1P52655 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.71■□□□□ 0.43
GTF2A1P52655 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GTF2A1P52655 AL009178.2-201ENST00000597278 2719 ntBASIC17.71■□□□□ 0.43
GTF2A1P52655 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
GTF2A1P52655 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GTF2A1P52655 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GTF2A1P52655 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GTF2A1P52655 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
GTF2A1P52655 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.71■□□□□ 0.43
GTF2A1P52655 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
GTF2A1P52655 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GTF2A1P52655 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GTF2A1P52655 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
GTF2A1P52655 DUX4L2-201ENST00000561772 1275 ntBASIC17.71■□□□□ 0.43
GTF2A1P52655 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.71■□□□□ 0.43
GTF2A1P52655 DUX4L6-201ENST00000626483 1275 ntBASIC17.71■□□□□ 0.43
GTF2A1P52655 DUX4L1-201ENST00000627662 1275 ntBASIC17.71■□□□□ 0.43
GTF2A1P52655 DUX4L8-201ENST00000629013 1275 ntBASIC17.71■□□□□ 0.43
GTF2A1P52655 DUX4L3-201ENST00000630187 1275 ntBASIC17.71■□□□□ 0.43
GTF2A1P52655 DUX4L7-201ENST00000630678 1275 ntBASIC17.71■□□□□ 0.43
GTF2A1P52655 DUX4L5-201ENST00000630834 1275 ntBASIC17.71■□□□□ 0.43
GTF2A1P52655 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GTF2A1P52655 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GTF2A1P52655 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC17.71■□□□□ 0.43
GTF2A1P52655 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GTF2A1P52655 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GTF2A1P52655 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
GTF2A1P52655 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
GTF2A1P52655 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GTF2A1P52655 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
GTF2A1P52655 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
GTF2A1P52655 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GTF2A1P52655 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.71■□□□□ 0.43
GTF2A1P52655 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
GTF2A1P52655 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
GTF2A1P52655 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
GTF2A1P52655 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
GTF2A1P52655 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
GTF2A1P52655 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GTF2A1P52655 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GTF2A1P52655 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
GTF2A1P52655 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GTF2A1P52655 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.7■□□□□ 0.42
GTF2A1P52655 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GTF2A1P52655 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GTF2A1P52655 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
GTF2A1P52655 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.7■□□□□ 0.42
GTF2A1P52655 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.7■□□□□ 0.42
GTF2A1P52655 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
GTF2A1P52655 AC007322.3-201ENST00000426526 701 ntBASIC17.7■□□□□ 0.42
GTF2A1P52655 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.7■□□□□ 0.42
GTF2A1P52655 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.7■□□□□ 0.42
GTF2A1P52655 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.7■□□□□ 0.42
GTF2A1P52655 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.7■□□□□ 0.42
GTF2A1P52655 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.7■□□□□ 0.42
GTF2A1P52655 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.7■□□□□ 0.42
GTF2A1P52655 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GTF2A1P52655 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.7■□□□□ 0.42
GTF2A1P52655 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GTF2A1P52655 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GTF2A1P52655 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GTF2A1P52655 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GTF2A1P52655 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GTF2A1P52655 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GTF2A1P52655 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
GTF2A1P52655 AC092384.3-202ENST00000564646 2873 ntBASIC17.69■□□□□ 0.42
GTF2A1P52655 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GTF2A1P52655 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.69■□□□□ 0.42
GTF2A1P52655 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GTF2A1P52655 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
GTF2A1P52655 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GTF2A1P52655 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
GTF2A1P52655 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
GTF2A1P52655 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GTF2A1P52655 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GTF2A1P52655 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GTF2A1P52655 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GTF2A1P52655 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.69■□□□□ 0.42
GTF2A1P52655 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GTF2A1P52655 AP001160.3-201ENST00000601484 763 ntBASIC17.69■□□□□ 0.42
GTF2A1P52655 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.69■□□□□ 0.42
GTF2A1P52655 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms