Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC097374.2-201ENST00000618617 1306 ntBASIC20.35■□□□□ 0.85
USP11P51784 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP11P51784 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP11P51784 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
USP11P51784 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP11P51784 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.35■□□□□ 0.85
USP11P51784 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.35■□□□□ 0.85
USP11P51784 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.35■□□□□ 0.85
USP11P51784 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.35■□□□□ 0.85
USP11P51784 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.35■□□□□ 0.85
USP11P51784 AP000867.3-201ENST00000524675 377 ntBASIC20.35■□□□□ 0.85
USP11P51784 AC005336.2-201ENST00000593183 939 ntBASIC20.35■□□□□ 0.85
USP11P51784 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.35■□□□□ 0.85
USP11P51784 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP11P51784 AL390961.4-201ENST00000623958 2535 ntBASIC20.35■□□□□ 0.85
USP11P51784 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
USP11P51784 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
USP11P51784 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
USP11P51784 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP11P51784 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP11P51784 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.34■□□□□ 0.85
USP11P51784 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
USP11P51784 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP11P51784 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP11P51784 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP11P51784 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP11P51784 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
USP11P51784 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.34■□□□□ 0.85
USP11P51784 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.34■□□□□ 0.85
USP11P51784 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.34■□□□□ 0.85
USP11P51784 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
USP11P51784 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP11P51784 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP11P51784 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.34■□□□□ 0.85
USP11P51784 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP11P51784 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP11P51784 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP11P51784 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP11P51784 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
USP11P51784 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
USP11P51784 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
USP11P51784 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
USP11P51784 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
USP11P51784 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.34■□□□□ 0.85
USP11P51784 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.34■□□□□ 0.85
USP11P51784 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP11P51784 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.34■□□□□ 0.85
USP11P51784 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.34■□□□□ 0.85
USP11P51784 AL138831.2-201ENST00000606564 490 ntBASIC20.34■□□□□ 0.85
USP11P51784 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
USP11P51784 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP11P51784 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP11P51784 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
USP11P51784 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
USP11P51784 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP11P51784 AC125634.1-201ENST00000438758 1403 ntBASIC20.34■□□□□ 0.85
USP11P51784 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP11P51784 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP11P51784 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP11P51784 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP11P51784 KRT8P47-201ENST00000604727 1398 ntBASIC20.34■□□□□ 0.85
USP11P51784 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP11P51784 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP11P51784 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.33■□□□□ 0.85
USP11P51784 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP11P51784 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP11P51784 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.33■□□□□ 0.85
USP11P51784 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
USP11P51784 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.33■□□□□ 0.85
USP11P51784 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP11P51784 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP11P51784 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP11P51784 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
USP11P51784 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
USP11P51784 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
USP11P51784 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
USP11P51784 NUS1P1-201ENST00000446295 882 ntBASIC20.33■□□□□ 0.85
USP11P51784 AC104819.1-201ENST00000504587 486 ntBASIC20.33■□□□□ 0.85
USP11P51784 KRT18P56-201ENST00000507275 550 ntBASIC20.33■□□□□ 0.85
USP11P51784 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
USP11P51784 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.33■□□□□ 0.85
USP11P51784 AC074051.2-201ENST00000565115 352 ntBASIC20.33■□□□□ 0.85
USP11P51784 MIR3652-201ENST00000579335 131 ntBASIC20.33■□□□□ 0.85
USP11P51784 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.33■□□□□ 0.85
USP11P51784 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.33■□□□□ 0.84
USP11P51784 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
USP11P51784 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
USP11P51784 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
USP11P51784 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
USP11P51784 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
USP11P51784 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
USP11P51784 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
USP11P51784 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
USP11P51784 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
USP11P51784 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.32■□□□□ 0.84
USP11P51784 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP11P51784 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP11P51784 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP11P51784 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP11P51784 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms