Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC31.81■■■□□ 2.68
SMARCA2P51531 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC31.81■■■□□ 2.68
SMARCA2P51531 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
SMARCA2P51531 AC092902.6-201ENST00000641783 218 ntBASIC31.81■■■□□ 2.68
SMARCA2P51531 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
SMARCA2P51531 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC31.81■■■□□ 2.68
SMARCA2P51531 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC31.81■■■□□ 2.68
SMARCA2P51531 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
SMARCA2P51531 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC31.81■■■□□ 2.68
SMARCA2P51531 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC31.81■■■□□ 2.68
SMARCA2P51531 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC31.81■■■□□ 2.68
SMARCA2P51531 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC31.81■■■□□ 2.68
SMARCA2P51531 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
SMARCA2P51531 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC31.81■■■□□ 2.68
SMARCA2P51531 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC31.81■■■□□ 2.68
SMARCA2P51531 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC31.81■■■□□ 2.68
SMARCA2P51531 OR7E47P-204ENST00000575924 449 ntBASIC31.8■■■□□ 2.68
SMARCA2P51531 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
SMARCA2P51531 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC31.8■■■□□ 2.68
SMARCA2P51531 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
SMARCA2P51531 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
SMARCA2P51531 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
SMARCA2P51531 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
SMARCA2P51531 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC31.79■■■□□ 2.68
SMARCA2P51531 AC023141.5-201ENST00000458585 616 ntBASIC31.79■■■□□ 2.68
SMARCA2P51531 AQP6-205ENST00000618286 829 ntTSL 5 BASIC31.79■■■□□ 2.68
SMARCA2P51531 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC31.79■■■□□ 2.68
SMARCA2P51531 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC31.79■■■□□ 2.68
SMARCA2P51531 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC31.78■■■□□ 2.68
SMARCA2P51531 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
SMARCA2P51531 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
SMARCA2P51531 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC31.78■■■□□ 2.68
SMARCA2P51531 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC31.78■■■□□ 2.68
SMARCA2P51531 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
SMARCA2P51531 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
SMARCA2P51531 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC31.78■■■□□ 2.68
SMARCA2P51531 AC004461.1-201ENST00000412461 403 ntBASIC31.78■■■□□ 2.68
SMARCA2P51531 PNKD-204ENST00000436005 978 ntTSL 5 BASIC31.78■■■□□ 2.68
SMARCA2P51531 SMN2-210ENST00000511812 867 ntTSL 2 BASIC31.78■■■□□ 2.68
SMARCA2P51531 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
SMARCA2P51531 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC31.78■■■□□ 2.68
SMARCA2P51531 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC31.78■■■□□ 2.68
SMARCA2P51531 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
SMARCA2P51531 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
SMARCA2P51531 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
SMARCA2P51531 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
SMARCA2P51531 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
SMARCA2P51531 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC31.77■■■□□ 2.68
SMARCA2P51531 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC31.77■■■□□ 2.68
SMARCA2P51531 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
SMARCA2P51531 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
SMARCA2P51531 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
SMARCA2P51531 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC31.77■■■□□ 2.68
SMARCA2P51531 BCAR1-209ENST00000546196 1340 ntBASIC31.77■■■□□ 2.68
SMARCA2P51531 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC31.77■■■□□ 2.68
SMARCA2P51531 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
SMARCA2P51531 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC31.77■■■□□ 2.68
SMARCA2P51531 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
SMARCA2P51531 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC31.77■■■□□ 2.68
SMARCA2P51531 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC31.77■■■□□ 2.68
SMARCA2P51531 AC022145.2-201ENST00000598203 171 ntBASIC31.77■■■□□ 2.68
SMARCA2P51531 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC31.76■■■□□ 2.68
SMARCA2P51531 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.68
SMARCA2P51531 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
SMARCA2P51531 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC31.76■■■□□ 2.68
SMARCA2P51531 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC31.76■■■□□ 2.67
SMARCA2P51531 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
SMARCA2P51531 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
SMARCA2P51531 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC31.76■■■□□ 2.67
SMARCA2P51531 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC31.76■■■□□ 2.67
SMARCA2P51531 CCDC74BP1-201ENST00000508880 1123 ntBASIC31.76■■■□□ 2.67
SMARCA2P51531 AC109322.1-201ENST00000524499 1264 ntBASIC31.76■■■□□ 2.67
SMARCA2P51531 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC31.76■■■□□ 2.67
SMARCA2P51531 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
SMARCA2P51531 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC31.75■■■□□ 2.67
SMARCA2P51531 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
SMARCA2P51531 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
SMARCA2P51531 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC31.75■■■□□ 2.67
SMARCA2P51531 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
SMARCA2P51531 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
SMARCA2P51531 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
SMARCA2P51531 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC31.75■■■□□ 2.67
SMARCA2P51531 PON3-205ENST00000451904 1053 ntTSL 3 BASIC31.75■■■□□ 2.67
SMARCA2P51531 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC31.75■■■□□ 2.67
SMARCA2P51531 AC015911.4-201ENST00000588022 1070 ntBASIC31.75■■■□□ 2.67
SMARCA2P51531 AC004835.2-201ENST00000603762 682 ntBASIC31.75■■■□□ 2.67
SMARCA2P51531 AC068137.2-201ENST00000605408 478 ntBASIC31.75■■■□□ 2.67
SMARCA2P51531 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC31.75■■■□□ 2.67
SMARCA2P51531 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
SMARCA2P51531 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.67
SMARCA2P51531 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
SMARCA2P51531 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
SMARCA2P51531 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
SMARCA2P51531 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC31.74■■■□□ 2.67
SMARCA2P51531 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
SMARCA2P51531 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC31.74■■■□□ 2.67
SMARCA2P51531 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
SMARCA2P51531 CD99-202ENST00000381180 530 ntTSL 2 BASIC31.74■■■□□ 2.67
SMARCA2P51531 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC31.74■■■□□ 2.67
SMARCA2P51531 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC31.74■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms