Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDE6CP51160 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PDE6CP51160 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.5■□□□□ 0.71
PDE6CP51160 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.5■□□□□ 0.71
PDE6CP51160 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.5■□□□□ 0.71
PDE6CP51160 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PDE6CP51160 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PDE6CP51160 MIR3917-201ENST00000580971 93 ntBASIC19.5■□□□□ 0.71
PDE6CP51160 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDE6CP51160 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.5■□□□□ 0.71
PDE6CP51160 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PDE6CP51160 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDE6CP51160 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
PDE6CP51160 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDE6CP51160 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.49■□□□□ 0.71
PDE6CP51160 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDE6CP51160 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.49■□□□□ 0.71
PDE6CP51160 AC068880.1-201ENST00000507289 2297 ntBASIC19.49■□□□□ 0.71
PDE6CP51160 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDE6CP51160 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PDE6CP51160 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDE6CP51160 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDE6CP51160 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
PDE6CP51160 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.49■□□□□ 0.71
PDE6CP51160 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
PDE6CP51160 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDE6CP51160 HBZP1-201ENST00000354915 429 ntBASIC19.49■□□□□ 0.71
PDE6CP51160 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.49■□□□□ 0.71
PDE6CP51160 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.49■□□□□ 0.71
PDE6CP51160 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.49■□□□□ 0.71
PDE6CP51160 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.49■□□□□ 0.71
PDE6CP51160 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDE6CP51160 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.49■□□□□ 0.71
PDE6CP51160 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.49■□□□□ 0.71
PDE6CP51160 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
PDE6CP51160 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDE6CP51160 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
PDE6CP51160 AC069148.1-201ENST00000608741 768 ntBASIC19.49■□□□□ 0.71
PDE6CP51160 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.49■□□□□ 0.71
PDE6CP51160 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDE6CP51160 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDE6CP51160 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PDE6CP51160 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDE6CP51160 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PDE6CP51160 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDE6CP51160 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PDE6CP51160 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDE6CP51160 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDE6CP51160 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDE6CP51160 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.49■□□□□ 0.71
PDE6CP51160 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PDE6CP51160 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDE6CP51160 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.48■□□□□ 0.71
PDE6CP51160 AC008764.6-201ENST00000595909 2069 ntBASIC19.48■□□□□ 0.71
PDE6CP51160 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDE6CP51160 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDE6CP51160 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDE6CP51160 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.48■□□□□ 0.71
PDE6CP51160 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.48■□□□□ 0.71
PDE6CP51160 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PDE6CP51160 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDE6CP51160 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDE6CP51160 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDE6CP51160 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDE6CP51160 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
PDE6CP51160 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PDE6CP51160 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.48■□□□□ 0.71
PDE6CP51160 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.48■□□□□ 0.71
PDE6CP51160 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.48■□□□□ 0.71
PDE6CP51160 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.48■□□□□ 0.71
PDE6CP51160 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PDE6CP51160 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDE6CP51160 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDE6CP51160 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.48■□□□□ 0.71
PDE6CP51160 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.48■□□□□ 0.71
PDE6CP51160 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDE6CP51160 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDE6CP51160 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDE6CP51160 AC093010.1-201ENST00000473625 1624 ntBASIC19.47■□□□□ 0.71
PDE6CP51160 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDE6CP51160 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PDE6CP51160 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.47■□□□□ 0.71
PDE6CP51160 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDE6CP51160 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PDE6CP51160 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PDE6CP51160 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDE6CP51160 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.47■□□□□ 0.71
PDE6CP51160 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.47■□□□□ 0.71
PDE6CP51160 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.47■□□□□ 0.71
PDE6CP51160 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDE6CP51160 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PDE6CP51160 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDE6CP51160 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDE6CP51160 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDE6CP51160 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDE6CP51160 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDE6CP51160 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
PDE6CP51160 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PDE6CP51160 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.46■□□□□ 0.71
PDE6CP51160 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms