Protein–RNA interactions for Protein: P49682

CXCR3, C-X-C chemokine receptor type 3, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR3P49682 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CXCR3P49682 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CXCR3P49682 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.65■□□□□ 0.58
CXCR3P49682 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CXCR3P49682 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
CXCR3P49682 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
CXCR3P49682 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
CXCR3P49682 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CXCR3P49682 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.64■□□□□ 0.57
CXCR3P49682 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CXCR3P49682 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.64■□□□□ 0.57
CXCR3P49682 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.64■□□□□ 0.57
CXCR3P49682 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CXCR3P49682 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CXCR3P49682 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CXCR3P49682 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CXCR3P49682 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CXCR3P49682 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CXCR3P49682 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CXCR3P49682 DRAXINP1-201ENST00000437611 948 ntBASIC18.64■□□□□ 0.57
CXCR3P49682 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.64■□□□□ 0.57
CXCR3P49682 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CXCR3P49682 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.64■□□□□ 0.57
CXCR3P49682 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.64■□□□□ 0.57
CXCR3P49682 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.64■□□□□ 0.57
CXCR3P49682 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CXCR3P49682 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CXCR3P49682 KRT18P1-202ENST00000452408 1331 ntBASIC18.64■□□□□ 0.57
CXCR3P49682 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
CXCR3P49682 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CXCR3P49682 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CXCR3P49682 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CXCR3P49682 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CXCR3P49682 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CXCR3P49682 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CXCR3P49682 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CXCR3P49682 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.64■□□□□ 0.57
CXCR3P49682 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.63■□□□□ 0.57
CXCR3P49682 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CXCR3P49682 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CXCR3P49682 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CXCR3P49682 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CXCR3P49682 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CXCR3P49682 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.63■□□□□ 0.57
CXCR3P49682 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CXCR3P49682 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.63■□□□□ 0.57
CXCR3P49682 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CXCR3P49682 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CXCR3P49682 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CXCR3P49682 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CXCR3P49682 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.63■□□□□ 0.57
CXCR3P49682 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CXCR3P49682 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.63■□□□□ 0.57
CXCR3P49682 SLC25A6P5-201ENST00000435663 894 ntBASIC18.63■□□□□ 0.57
CXCR3P49682 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CXCR3P49682 TPSP2-201ENST00000561760 610 ntBASIC18.63■□□□□ 0.57
CXCR3P49682 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.63■□□□□ 0.57
CXCR3P49682 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CXCR3P49682 AP002414.4-201ENST00000589764 1148 ntBASIC18.63■□□□□ 0.57
CXCR3P49682 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CXCR3P49682 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.63■□□□□ 0.57
CXCR3P49682 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CXCR3P49682 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.63■□□□□ 0.57
CXCR3P49682 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.63■□□□□ 0.57
CXCR3P49682 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.63■□□□□ 0.57
CXCR3P49682 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CXCR3P49682 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
CXCR3P49682 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
CXCR3P49682 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CXCR3P49682 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.63■□□□□ 0.57
CXCR3P49682 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CXCR3P49682 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CXCR3P49682 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CXCR3P49682 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
CXCR3P49682 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CXCR3P49682 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CXCR3P49682 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CXCR3P49682 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CXCR3P49682 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CXCR3P49682 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
CXCR3P49682 AC007613.1-201ENST00000572811 2597 ntBASIC18.62■□□□□ 0.57
CXCR3P49682 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CXCR3P49682 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CXCR3P49682 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
CXCR3P49682 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.62■□□□□ 0.57
CXCR3P49682 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.62■□□□□ 0.57
CXCR3P49682 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CXCR3P49682 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.62■□□□□ 0.57
CXCR3P49682 AC093458.2-201ENST00000623150 629 ntBASIC18.62■□□□□ 0.57
CXCR3P49682 KRT8P47-201ENST00000604727 1398 ntBASIC18.62■□□□□ 0.57
CXCR3P49682 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CXCR3P49682 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CXCR3P49682 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CXCR3P49682 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CXCR3P49682 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CXCR3P49682 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CXCR3P49682 AC100803.2-201ENST00000562459 1963 ntBASIC18.62■□□□□ 0.57
CXCR3P49682 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CXCR3P49682 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CXCR3P49682 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms