Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CDC34P49427 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC14.27□□□□□ -0.12
CDC34P49427 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDC34P49427 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CDC34P49427 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDC34P49427 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDC34P49427 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDC34P49427 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CDC34P49427 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDC34P49427 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDC34P49427 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC14.27□□□□□ -0.13
CDC34P49427 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC14.27□□□□□ -0.13
CDC34P49427 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC14.27□□□□□ -0.13
CDC34P49427 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC14.27□□□□□ -0.13
CDC34P49427 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDC34P49427 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDC34P49427 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDC34P49427 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDC34P49427 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.27□□□□□ -0.13
CDC34P49427 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.27□□□□□ -0.13
CDC34P49427 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDC34P49427 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDC34P49427 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDC34P49427 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDC34P49427 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.13
CDC34P49427 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CDC34P49427 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDC34P49427 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDC34P49427 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.27□□□□□ -0.13
CDC34P49427 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDC34P49427 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC14.27□□□□□ -0.13
CDC34P49427 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
CDC34P49427 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.27□□□□□ -0.13
CDC34P49427 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDC34P49427 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CDC34P49427 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDC34P49427 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC14.26□□□□□ -0.13
CDC34P49427 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CDC34P49427 AL138688.1-201ENST00000624851 1594 ntBASIC14.26□□□□□ -0.13
CDC34P49427 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC34P49427 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDC34P49427 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC34P49427 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC34P49427 AL355312.1-201ENST00000407115 2176 ntBASIC14.26□□□□□ -0.13
CDC34P49427 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC14.26□□□□□ -0.13
CDC34P49427 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC34P49427 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC34P49427 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CDC34P49427 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CDC34P49427 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC34P49427 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.26□□□□□ -0.13
CDC34P49427 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC34P49427 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC34P49427 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC34P49427 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
CDC34P49427 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDC34P49427 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC14.26□□□□□ -0.13
CDC34P49427 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC14.26□□□□□ -0.13
CDC34P49427 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC34P49427 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC14.26□□□□□ -0.13
CDC34P49427 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC14.26□□□□□ -0.13
CDC34P49427 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDC34P49427 Six3os1_6.1-201ENST00000620790 196 ntBASIC14.26□□□□□ -0.13
CDC34P49427 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
CDC34P49427 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDC34P49427 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
CDC34P49427 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.26□□□□□ -0.13
CDC34P49427 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC34P49427 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC34P49427 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC34P49427 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC34P49427 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC34P49427 AL109659.2-201ENST00000606809 1674 ntBASIC14.26□□□□□ -0.13
CDC34P49427 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDC34P49427 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC34P49427 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC34P49427 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC34P49427 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC34P49427 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC14.25□□□□□ -0.13
CDC34P49427 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC34P49427 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDC34P49427 AC018695.7-201ENST00000624587 2492 ntBASIC14.25□□□□□ -0.13
CDC34P49427 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC34P49427 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC34P49427 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC34P49427 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC34P49427 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC34P49427 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC34P49427 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC34P49427 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC34P49427 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC34P49427 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CDC34P49427 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC14.25□□□□□ -0.13
CDC34P49427 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC34P49427 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CDC34P49427 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC34P49427 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC34P49427 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC34P49427 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC34P49427 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms