Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SLC1A6P48664 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A6P48664 AC133963.1-201ENST00000504166 1679 ntBASIC17.76■□□□□ 0.43
SLC1A6P48664 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC1A6P48664 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SLC1A6P48664 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SLC1A6P48664 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
SLC1A6P48664 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A6P48664 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SLC1A6P48664 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A6P48664 AL024508.2-201ENST00000607749 1894 ntBASIC17.75■□□□□ 0.43
SLC1A6P48664 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A6P48664 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A6P48664 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A6P48664 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.75■□□□□ 0.43
SLC1A6P48664 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SLC1A6P48664 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A6P48664 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A6P48664 KRT8P7-201ENST00000533003 1432 ntBASIC17.75■□□□□ 0.43
SLC1A6P48664 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A6P48664 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SLC1A6P48664 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A6P48664 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A6P48664 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A6P48664 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.75■□□□□ 0.43
SLC1A6P48664 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A6P48664 DGCR10-201ENST00000609839 495 ntBASIC17.75■□□□□ 0.43
SLC1A6P48664 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC1A6P48664 CROCCP2-202ENST00000412962 2773 ntBASIC17.75■□□□□ 0.43
SLC1A6P48664 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A6P48664 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A6P48664 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A6P48664 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A6P48664 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC1A6P48664 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SLC1A6P48664 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A6P48664 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A6P48664 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A6P48664 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A6P48664 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC1A6P48664 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC1A6P48664 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SLC1A6P48664 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC1A6P48664 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC1A6P48664 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SLC1A6P48664 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SLC1A6P48664 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC1A6P48664 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC1A6P48664 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC1A6P48664 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
SLC1A6P48664 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
SLC1A6P48664 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.74■□□□□ 0.43
SLC1A6P48664 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC1A6P48664 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.74■□□□□ 0.43
SLC1A6P48664 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC1A6P48664 DUTP2-201ENST00000519164 463 ntBASIC17.74■□□□□ 0.43
SLC1A6P48664 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC1A6P48664 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SLC1A6P48664 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.74■□□□□ 0.43
SLC1A6P48664 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC1A6P48664 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC1A6P48664 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC1A6P48664 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SLC1A6P48664 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC1A6P48664 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC1A6P48664 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC1A6P48664 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC1A6P48664 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC1A6P48664 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC1A6P48664 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SLC1A6P48664 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC1A6P48664 AC100803.2-201ENST00000562459 1963 ntBASIC17.73■□□□□ 0.43
SLC1A6P48664 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A6P48664 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A6P48664 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A6P48664 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A6P48664 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A6P48664 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SLC1A6P48664 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A6P48664 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A6P48664 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC1A6P48664 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A6P48664 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SLC1A6P48664 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC1A6P48664 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.73■□□□□ 0.43
SLC1A6P48664 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.73■□□□□ 0.43
SLC1A6P48664 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A6P48664 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SLC1A6P48664 AC128676.1-201ENST00000454392 318 ntBASIC17.73■□□□□ 0.43
SLC1A6P48664 AC097488.1-201ENST00000507834 756 ntBASIC17.73■□□□□ 0.43
SLC1A6P48664 RPPH1-201ENST00000516869 333 ntBASIC17.73■□□□□ 0.43
SLC1A6P48664 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.73■□□□□ 0.43
SLC1A6P48664 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.73■□□□□ 0.43
SLC1A6P48664 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
SLC1A6P48664 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC1A6P48664 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A6P48664 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A6P48664 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A6P48664 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A6P48664 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms