Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCNFP41002 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCNFP41002 HOXB1-202ENST00000577092 1414 ntBASIC18.15■□□□□ 0.5
CCNFP41002 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CCNFP41002 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.14■□□□□ 0.49
CCNFP41002 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCNFP41002 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCNFP41002 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCNFP41002 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCNFP41002 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCNFP41002 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCNFP41002 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CCNFP41002 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.14■□□□□ 0.49
CCNFP41002 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCNFP41002 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CCNFP41002 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCNFP41002 AC113347.1-201ENST00000413321 391 ntBASIC18.14■□□□□ 0.49
CCNFP41002 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCNFP41002 ECEL1P3-201ENST00000427961 737 ntBASIC18.14■□□□□ 0.49
CCNFP41002 ATP5G1P1-201ENST00000448724 379 ntBASIC18.14■□□□□ 0.49
CCNFP41002 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.14■□□□□ 0.49
CCNFP41002 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.14■□□□□ 0.49
CCNFP41002 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCNFP41002 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCNFP41002 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCNFP41002 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCNFP41002 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCNFP41002 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.14■□□□□ 0.49
CCNFP41002 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCNFP41002 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.14■□□□□ 0.49
CCNFP41002 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCNFP41002 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCNFP41002 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCNFP41002 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCNFP41002 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
CCNFP41002 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.14■□□□□ 0.49
CCNFP41002 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
CCNFP41002 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCNFP41002 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCNFP41002 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCNFP41002 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCNFP41002 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCNFP41002 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CCNFP41002 LINC01126-201ENST00000623515 1646 ntBASIC18.13■□□□□ 0.49
CCNFP41002 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCNFP41002 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCNFP41002 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCNFP41002 HCG11-201ENST00000411553 5696 ntBASIC18.13■□□□□ 0.49
CCNFP41002 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCNFP41002 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
CCNFP41002 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCNFP41002 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCNFP41002 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.13■□□□□ 0.49
CCNFP41002 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCNFP41002 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCNFP41002 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.13■□□□□ 0.49
CCNFP41002 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCNFP41002 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.13■□□□□ 0.49
CCNFP41002 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.13■□□□□ 0.49
CCNFP41002 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
CCNFP41002 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.13■□□□□ 0.49
CCNFP41002 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CCNFP41002 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCNFP41002 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCNFP41002 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCNFP41002 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCNFP41002 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCNFP41002 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCNFP41002 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CCNFP41002 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
CCNFP41002 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCNFP41002 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.13■□□□□ 0.49
CCNFP41002 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCNFP41002 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCNFP41002 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CCNFP41002 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCNFP41002 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCNFP41002 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CCNFP41002 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCNFP41002 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCNFP41002 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCNFP41002 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CCNFP41002 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.12■□□□□ 0.49
CCNFP41002 AL137013.1-201ENST00000432946 1228 ntBASIC18.12■□□□□ 0.49
CCNFP41002 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.12■□□□□ 0.49
CCNFP41002 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.12■□□□□ 0.49
CCNFP41002 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CCNFP41002 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.12■□□□□ 0.49
CCNFP41002 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
CCNFP41002 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCNFP41002 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.12■□□□□ 0.49
CCNFP41002 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.12■□□□□ 0.49
CCNFP41002 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CCNFP41002 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCNFP41002 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.12■□□□□ 0.49
CCNFP41002 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCNFP41002 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.12■□□□□ 0.49
CCNFP41002 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCNFP41002 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.12■□□□□ 0.49
CCNFP41002 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms