Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SCNN1AP37088 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCNN1AP37088 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SCNN1AP37088 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCNN1AP37088 GNAS-203ENST00000306120 1878 ntBASIC18.74■□□□□ 0.59
SCNN1AP37088 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCNN1AP37088 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SCNN1AP37088 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SCNN1AP37088 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCNN1AP37088 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCNN1AP37088 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCNN1AP37088 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SCNN1AP37088 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCNN1AP37088 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCNN1AP37088 TSSC2-201ENST00000450217 709 ntBASIC18.74■□□□□ 0.59
SCNN1AP37088 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.74■□□□□ 0.59
SCNN1AP37088 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.74■□□□□ 0.59
SCNN1AP37088 IGHV3-41-201ENST00000613121 348 ntBASIC18.74■□□□□ 0.59
SCNN1AP37088 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SCNN1AP37088 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCNN1AP37088 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCNN1AP37088 AC007613.1-201ENST00000572811 2597 ntBASIC18.74■□□□□ 0.59
SCNN1AP37088 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
SCNN1AP37088 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SCNN1AP37088 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCNN1AP37088 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.74■□□□□ 0.59
SCNN1AP37088 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SCNN1AP37088 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SCNN1AP37088 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCNN1AP37088 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCNN1AP37088 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCNN1AP37088 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCNN1AP37088 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCNN1AP37088 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCNN1AP37088 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SCNN1AP37088 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.73■□□□□ 0.59
SCNN1AP37088 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
SCNN1AP37088 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCNN1AP37088 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCNN1AP37088 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCNN1AP37088 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCNN1AP37088 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SCNN1AP37088 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SCNN1AP37088 AL845331.1-201ENST00000424978 1190 ntBASIC18.73■□□□□ 0.59
SCNN1AP37088 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.73■□□□□ 0.59
SCNN1AP37088 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCNN1AP37088 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCNN1AP37088 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.73■□□□□ 0.59
SCNN1AP37088 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SCNN1AP37088 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.73■□□□□ 0.59
SCNN1AP37088 AC124864.1-201ENST00000623408 392 ntBASIC18.73■□□□□ 0.59
SCNN1AP37088 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCNN1AP37088 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCNN1AP37088 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCNN1AP37088 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCNN1AP37088 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.73■□□□□ 0.59
SCNN1AP37088 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
SCNN1AP37088 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.73■□□□□ 0.59
SCNN1AP37088 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCNN1AP37088 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCNN1AP37088 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.73■□□□□ 0.59
SCNN1AP37088 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SCNN1AP37088 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCNN1AP37088 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SCNN1AP37088 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
SCNN1AP37088 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCNN1AP37088 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.72■□□□□ 0.59
SCNN1AP37088 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SCNN1AP37088 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCNN1AP37088 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.72■□□□□ 0.59
SCNN1AP37088 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.72■□□□□ 0.59
SCNN1AP37088 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SCNN1AP37088 DRAXINP1-201ENST00000437611 948 ntBASIC18.72■□□□□ 0.59
SCNN1AP37088 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.72■□□□□ 0.59
SCNN1AP37088 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SCNN1AP37088 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.72■□□□□ 0.59
SCNN1AP37088 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.72■□□□□ 0.59
SCNN1AP37088 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCNN1AP37088 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCNN1AP37088 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCNN1AP37088 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.72■□□□□ 0.59
SCNN1AP37088 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.72■□□□□ 0.59
SCNN1AP37088 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SCNN1AP37088 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
SCNN1AP37088 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SCNN1AP37088 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCNN1AP37088 AC068880.1-201ENST00000507289 2297 ntBASIC18.71■□□□□ 0.59
SCNN1AP37088 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SCNN1AP37088 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.71■□□□□ 0.59
SCNN1AP37088 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCNN1AP37088 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SCNN1AP37088 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCNN1AP37088 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SCNN1AP37088 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.71■□□□□ 0.59
SCNN1AP37088 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SCNN1AP37088 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCNN1AP37088 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.71■□□□□ 0.59
SCNN1AP37088 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCNN1AP37088 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCNN1AP37088 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms