Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.19■□□□□ 0.18
SOX6P35712 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SOX6P35712 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SOX6P35712 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SOX6P35712 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SOX6P35712 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SOX6P35712 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.19■□□□□ 0.18
SOX6P35712 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SOX6P35712 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SOX6P35712 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SOX6P35712 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SOX6P35712 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.19■□□□□ 0.18
SOX6P35712 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.19■□□□□ 0.18
SOX6P35712 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SOX6P35712 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SOX6P35712 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SOX6P35712 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.19■□□□□ 0.18
SOX6P35712 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SOX6P35712 LSM12P1-201ENST00000411836 588 ntBASIC16.19■□□□□ 0.18
SOX6P35712 TSPY6P-201ENST00000448518 926 ntBASIC16.19■□□□□ 0.18
SOX6P35712 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.19■□□□□ 0.18
SOX6P35712 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.19■□□□□ 0.18
SOX6P35712 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SOX6P35712 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SOX6P35712 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SOX6P35712 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.19■□□□□ 0.18
SOX6P35712 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.19■□□□□ 0.18
SOX6P35712 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SOX6P35712 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SOX6P35712 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SOX6P35712 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.19■□□□□ 0.18
SOX6P35712 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SOX6P35712 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SOX6P35712 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SOX6P35712 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SOX6P35712 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SOX6P35712 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SOX6P35712 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
SOX6P35712 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SOX6P35712 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SOX6P35712 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.19■□□□□ 0.18
SOX6P35712 KRT18P55-202ENST00000578578 1546 ntBASIC16.19■□□□□ 0.18
SOX6P35712 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SOX6P35712 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SOX6P35712 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SOX6P35712 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SOX6P35712 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SOX6P35712 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX6P35712 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.18■□□□□ 0.18
SOX6P35712 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.18■□□□□ 0.18
SOX6P35712 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX6P35712 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX6P35712 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX6P35712 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX6P35712 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX6P35712 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX6P35712 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX6P35712 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX6P35712 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SOX6P35712 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX6P35712 PCDH8P1-201ENST00000428983 2773 ntBASIC16.18■□□□□ 0.18
SOX6P35712 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SOX6P35712 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX6P35712 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
SOX6P35712 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX6P35712 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX6P35712 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.18■□□□□ 0.18
SOX6P35712 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.18■□□□□ 0.18
SOX6P35712 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SOX6P35712 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SOX6P35712 BX276092.2-201ENST00000417668 665 ntBASIC16.18■□□□□ 0.18
SOX6P35712 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.18■□□□□ 0.18
SOX6P35712 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.18■□□□□ 0.18
SOX6P35712 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.18■□□□□ 0.18
SOX6P35712 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SOX6P35712 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.18■□□□□ 0.18
SOX6P35712 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SOX6P35712 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX6P35712 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.18■□□□□ 0.18
SOX6P35712 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX6P35712 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX6P35712 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SOX6P35712 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SOX6P35712 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SOX6P35712 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX6P35712 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX6P35712 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX6P35712 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX6P35712 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX6P35712 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.18■□□□□ 0.18
SOX6P35712 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SOX6P35712 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
SOX6P35712 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SOX6P35712 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SOX6P35712 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SOX6P35712 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SOX6P35712 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.17■□□□□ 0.18
SOX6P35712 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
SOX6P35712 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SOX6P35712 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms