Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTNNA1P35221 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTNNA1P35221 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTNNA1P35221 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTNNA1P35221 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTNNA1P35221 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.06■□□□□ 0.64
CTNNA1P35221 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CTNNA1P35221 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.06■□□□□ 0.64
CTNNA1P35221 AL390955.1-201ENST00000428694 934 ntBASIC19.06■□□□□ 0.64
CTNNA1P35221 TSPY7P-201ENST00000431358 1114 ntBASIC19.06■□□□□ 0.64
CTNNA1P35221 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTNNA1P35221 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.06■□□□□ 0.64
CTNNA1P35221 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CTNNA1P35221 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.06■□□□□ 0.64
CTNNA1P35221 MIR4785-201ENST00000585005 73 ntBASIC19.06■□□□□ 0.64
CTNNA1P35221 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.06■□□□□ 0.64
CTNNA1P35221 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.06■□□□□ 0.64
CTNNA1P35221 AC116562.4-202ENST00000641738 218 ntBASIC19.06■□□□□ 0.64
CTNNA1P35221 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.06■□□□□ 0.64
CTNNA1P35221 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTNNA1P35221 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CTNNA1P35221 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.06■□□□□ 0.64
CTNNA1P35221 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.06■□□□□ 0.64
CTNNA1P35221 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTNNA1P35221 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
CTNNA1P35221 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTNNA1P35221 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CTNNA1P35221 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTNNA1P35221 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.05■□□□□ 0.64
CTNNA1P35221 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CTNNA1P35221 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTNNA1P35221 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.05■□□□□ 0.64
CTNNA1P35221 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CTNNA1P35221 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTNNA1P35221 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTNNA1P35221 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.05■□□□□ 0.64
CTNNA1P35221 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTNNA1P35221 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CTNNA1P35221 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTNNA1P35221 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.05■□□□□ 0.64
CTNNA1P35221 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CTNNA1P35221 AC008550.1-201ENST00000511500 884 ntBASIC19.05■□□□□ 0.64
CTNNA1P35221 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.05■□□□□ 0.64
CTNNA1P35221 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.05■□□□□ 0.64
CTNNA1P35221 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTNNA1P35221 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTNNA1P35221 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CTNNA1P35221 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTNNA1P35221 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CTNNA1P35221 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTNNA1P35221 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.05■□□□□ 0.64
CTNNA1P35221 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
CTNNA1P35221 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.04■□□□□ 0.64
CTNNA1P35221 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTNNA1P35221 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CTNNA1P35221 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTNNA1P35221 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTNNA1P35221 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTNNA1P35221 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTNNA1P35221 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTNNA1P35221 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
CTNNA1P35221 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTNNA1P35221 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTNNA1P35221 MIR718-201ENST00000390190 70 ntBASIC19.04■□□□□ 0.64
CTNNA1P35221 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTNNA1P35221 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTNNA1P35221 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.04■□□□□ 0.64
CTNNA1P35221 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.04■□□□□ 0.64
CTNNA1P35221 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.04■□□□□ 0.64
CTNNA1P35221 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.04■□□□□ 0.64
CTNNA1P35221 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.04■□□□□ 0.64
CTNNA1P35221 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
CTNNA1P35221 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CTNNA1P35221 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CTNNA1P35221 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTNNA1P35221 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTNNA1P35221 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTNNA1P35221 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTNNA1P35221 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTNNA1P35221 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTNNA1P35221 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTNNA1P35221 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTNNA1P35221 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTNNA1P35221 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTNNA1P35221 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTNNA1P35221 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
CTNNA1P35221 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CTNNA1P35221 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTNNA1P35221 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.03■□□□□ 0.64
CTNNA1P35221 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTNNA1P35221 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTNNA1P35221 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CTNNA1P35221 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CTNNA1P35221 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CTNNA1P35221 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.03■□□□□ 0.64
CTNNA1P35221 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
CTNNA1P35221 AC010653.2-201ENST00000623505 997 ntBASIC19.03■□□□□ 0.64
CTNNA1P35221 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTNNA1P35221 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
CTNNA1P35221 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms