Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.48■□□□□ 0.55
SLC6A4P31645 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.48■□□□□ 0.55
SLC6A4P31645 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC6A4P31645 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
SLC6A4P31645 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.48■□□□□ 0.55
SLC6A4P31645 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SLC6A4P31645 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SLC6A4P31645 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
SLC6A4P31645 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SLC6A4P31645 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
SLC6A4P31645 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC6A4P31645 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
SLC6A4P31645 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC6A4P31645 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC6A4P31645 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SLC6A4P31645 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SLC6A4P31645 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.47■□□□□ 0.55
SLC6A4P31645 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SLC6A4P31645 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.47■□□□□ 0.55
SLC6A4P31645 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC6A4P31645 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SLC6A4P31645 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.47■□□□□ 0.55
SLC6A4P31645 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SLC6A4P31645 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC6A4P31645 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.47■□□□□ 0.55
SLC6A4P31645 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC6A4P31645 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SLC6A4P31645 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC6A4P31645 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SLC6A4P31645 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC6A4P31645 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
SLC6A4P31645 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC6A4P31645 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC6A4P31645 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
SLC6A4P31645 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC6A4P31645 TP73-AS1-210ENST00000637775 1455 ntBASIC18.46■□□□□ 0.55
SLC6A4P31645 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC6A4P31645 BICD1-207ENST00000551848 1962 ntBASIC18.46■□□□□ 0.55
SLC6A4P31645 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC6A4P31645 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.46■□□□□ 0.55
SLC6A4P31645 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SLC6A4P31645 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC6A4P31645 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC6A4P31645 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC6A4P31645 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SLC6A4P31645 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.46■□□□□ 0.55
SLC6A4P31645 RCN1P2-201ENST00000398357 915 ntBASIC18.46■□□□□ 0.55
SLC6A4P31645 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC6A4P31645 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC6A4P31645 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.46■□□□□ 0.55
SLC6A4P31645 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.46■□□□□ 0.55
SLC6A4P31645 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.46■□□□□ 0.55
SLC6A4P31645 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.46■□□□□ 0.55
SLC6A4P31645 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.46■□□□□ 0.55
SLC6A4P31645 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.46■□□□□ 0.55
SLC6A4P31645 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SLC6A4P31645 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.46■□□□□ 0.55
SLC6A4P31645 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SLC6A4P31645 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SLC6A4P31645 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC6A4P31645 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC6A4P31645 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC6A4P31645 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC6A4P31645 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC6A4P31645 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC6A4P31645 AP000997.3-201ENST00000623333 2250 ntBASIC18.46■□□□□ 0.54
SLC6A4P31645 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
SLC6A4P31645 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SLC6A4P31645 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.45■□□□□ 0.54
SLC6A4P31645 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC6A4P31645 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SLC6A4P31645 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLC6A4P31645 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC6A4P31645 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLC6A4P31645 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC6A4P31645 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC6A4P31645 AC100803.2-201ENST00000562459 1963 ntBASIC18.45■□□□□ 0.54
SLC6A4P31645 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC6A4P31645 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC6A4P31645 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLC6A4P31645 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.45■□□□□ 0.54
SLC6A4P31645 POM121L3P-201ENST00000419331 1163 ntBASIC18.45■□□□□ 0.54
SLC6A4P31645 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.45■□□□□ 0.54
SLC6A4P31645 EMBP1-201ENST00000458200 901 ntBASIC18.45■□□□□ 0.54
SLC6A4P31645 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.45■□□□□ 0.54
SLC6A4P31645 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.45■□□□□ 0.54
SLC6A4P31645 AC114341.1-201ENST00000618070 349 ntBASIC18.45■□□□□ 0.54
SLC6A4P31645 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC6A4P31645 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLC6A4P31645 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC6A4P31645 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.45■□□□□ 0.54
SLC6A4P31645 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.45■□□□□ 0.54
SLC6A4P31645 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.45■□□□□ 0.54
SLC6A4P31645 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLC6A4P31645 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.45■□□□□ 0.54
SLC6A4P31645 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.45■□□□□ 0.54
SLC6A4P31645 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC6A4P31645 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC6A4P31645 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC6A4P31645 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms