Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
SHC1P29353 AC009102.3-201ENST00000623118 1491 ntBASIC16.55■□□□□ 0.24
SHC1P29353 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHC1P29353 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHC1P29353 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHC1P29353 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.55■□□□□ 0.24
SHC1P29353 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHC1P29353 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.55■□□□□ 0.24
SHC1P29353 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SHC1P29353 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHC1P29353 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHC1P29353 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHC1P29353 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHC1P29353 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.55■□□□□ 0.24
SHC1P29353 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.55■□□□□ 0.24
SHC1P29353 AL445228.2-201ENST00000605589 952 ntBASIC16.55■□□□□ 0.24
SHC1P29353 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.55■□□□□ 0.24
SHC1P29353 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.55■□□□□ 0.24
SHC1P29353 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.55■□□□□ 0.24
SHC1P29353 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
SHC1P29353 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHC1P29353 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SHC1P29353 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHC1P29353 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHC1P29353 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SHC1P29353 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SHC1P29353 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SHC1P29353 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.55■□□□□ 0.24
SHC1P29353 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHC1P29353 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.54■□□□□ 0.24
SHC1P29353 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.54■□□□□ 0.24
SHC1P29353 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.54■□□□□ 0.24
SHC1P29353 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SHC1P29353 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
SHC1P29353 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.54■□□□□ 0.24
SHC1P29353 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHC1P29353 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHC1P29353 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SHC1P29353 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHC1P29353 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHC1P29353 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHC1P29353 SPDYE13P-201ENST00000445314 798 ntBASIC16.54■□□□□ 0.24
SHC1P29353 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.54■□□□□ 0.24
SHC1P29353 AL671277.2-201ENST00000458060 996 ntBASIC16.54■□□□□ 0.24
SHC1P29353 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.54■□□□□ 0.24
SHC1P29353 AC083849.1-201ENST00000615227 514 ntBASIC16.54■□□□□ 0.24
SHC1P29353 AL590326.2-201ENST00000625139 305 ntBASIC16.54■□□□□ 0.24
SHC1P29353 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SHC1P29353 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SHC1P29353 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHC1P29353 AC134043.2-201ENST00000624206 2238 ntBASIC16.54■□□□□ 0.24
SHC1P29353 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.54■□□□□ 0.24
SHC1P29353 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SHC1P29353 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.54■□□□□ 0.24
SHC1P29353 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SHC1P29353 LINC00896-202ENST00000609602 2128 ntBASIC16.54■□□□□ 0.24
SHC1P29353 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHC1P29353 AL391807.1-203ENST00000604392 2365 ntBASIC16.53■□□□□ 0.24
SHC1P29353 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SHC1P29353 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SHC1P29353 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHC1P29353 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.53■□□□□ 0.24
SHC1P29353 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHC1P29353 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SHC1P29353 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHC1P29353 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHC1P29353 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHC1P29353 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SHC1P29353 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SHC1P29353 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SHC1P29353 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHC1P29353 VENTXP5-201ENST00000523979 775 ntBASIC16.53■□□□□ 0.24
SHC1P29353 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.53■□□□□ 0.24
SHC1P29353 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.53■□□□□ 0.24
SHC1P29353 AL136038.4-201ENST00000603606 1261 ntBASIC16.53■□□□□ 0.24
SHC1P29353 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.53■□□□□ 0.24
SHC1P29353 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SHC1P29353 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.53■□□□□ 0.24
SHC1P29353 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.53■□□□□ 0.24
SHC1P29353 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHC1P29353 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.53■□□□□ 0.24
SHC1P29353 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SHC1P29353 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.53■□□□□ 0.24
SHC1P29353 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.53■□□□□ 0.24
SHC1P29353 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.53■□□□□ 0.24
SHC1P29353 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHC1P29353 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
SHC1P29353 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SHC1P29353 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.52■□□□□ 0.24
SHC1P29353 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SHC1P29353 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.52■□□□□ 0.24
SHC1P29353 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.52■□□□□ 0.24
SHC1P29353 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
SHC1P29353 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.52■□□□□ 0.24
SHC1P29353 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SHC1P29353 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SHC1P29353 AC135776.1-201ENST00000319817 2481 ntBASIC16.52■□□□□ 0.24
SHC1P29353 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SHC1P29353 HBZP1-201ENST00000354915 429 ntBASIC16.52■□□□□ 0.24
SHC1P29353 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms