Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
COL8A2P25067 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.22■□□□□ 0.03
COL8A2P25067 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC15.22■□□□□ 0.03
COL8A2P25067 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
COL8A2P25067 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.22■□□□□ 0.03
COL8A2P25067 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
COL8A2P25067 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.22■□□□□ 0.03
COL8A2P25067 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
COL8A2P25067 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL8A2P25067 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL8A2P25067 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL8A2P25067 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
COL8A2P25067 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
COL8A2P25067 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL8A2P25067 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.21■□□□□ 0.03
COL8A2P25067 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
COL8A2P25067 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC15.21■□□□□ 0.03
COL8A2P25067 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
COL8A2P25067 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
COL8A2P25067 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.21■□□□□ 0.03
COL8A2P25067 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL8A2P25067 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
COL8A2P25067 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL8A2P25067 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
COL8A2P25067 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL8A2P25067 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL8A2P25067 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL8A2P25067 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.21■□□□□ 0.03
COL8A2P25067 MTCL1P1-201ENST00000446207 792 ntBASIC15.21■□□□□ 0.03
COL8A2P25067 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.21■□□□□ 0.03
COL8A2P25067 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL8A2P25067 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.21■□□□□ 0.03
COL8A2P25067 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.21■□□□□ 0.03
COL8A2P25067 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL8A2P25067 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
COL8A2P25067 AC009154.2-201ENST00000621177 724 ntBASIC15.21■□□□□ 0.03
COL8A2P25067 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.21■□□□□ 0.03
COL8A2P25067 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
COL8A2P25067 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.21■□□□□ 0.03
COL8A2P25067 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.21■□□□□ 0.03
COL8A2P25067 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
COL8A2P25067 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
COL8A2P25067 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.21■□□□□ 0.02
COL8A2P25067 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
COL8A2P25067 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
COL8A2P25067 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.2■□□□□ 0.02
COL8A2P25067 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC15.2■□□□□ 0.02
COL8A2P25067 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL8A2P25067 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.2■□□□□ 0.02
COL8A2P25067 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.2■□□□□ 0.02
COL8A2P25067 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
COL8A2P25067 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL8A2P25067 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL8A2P25067 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL8A2P25067 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL8A2P25067 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COL8A2P25067 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL8A2P25067 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
COL8A2P25067 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
COL8A2P25067 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.2■□□□□ 0.02
COL8A2P25067 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COL8A2P25067 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COL8A2P25067 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
COL8A2P25067 NUS1P2-201ENST00000417358 873 ntBASIC15.2■□□□□ 0.02
COL8A2P25067 KRT16P4-201ENST00000453883 522 ntBASIC15.2■□□□□ 0.02
COL8A2P25067 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.2■□□□□ 0.02
COL8A2P25067 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.2■□□□□ 0.02
COL8A2P25067 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COL8A2P25067 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL8A2P25067 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL8A2P25067 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL8A2P25067 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL8A2P25067 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC15.2■□□□□ 0.02
COL8A2P25067 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.2■□□□□ 0.02
COL8A2P25067 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.2■□□□□ 0.02
COL8A2P25067 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.2■□□□□ 0.02
COL8A2P25067 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COL8A2P25067 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COL8A2P25067 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.2■□□□□ 0.02
COL8A2P25067 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.2■□□□□ 0.02
COL8A2P25067 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL8A2P25067 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL8A2P25067 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL8A2P25067 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.2■□□□□ 0.02
COL8A2P25067 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.2■□□□□ 0.02
COL8A2P25067 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL8A2P25067 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL8A2P25067 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
COL8A2P25067 AL138781.2-201ENST00000617896 1843 ntBASIC15.2■□□□□ 0.02
COL8A2P25067 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL8A2P25067 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL8A2P25067 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
COL8A2P25067 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL8A2P25067 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL8A2P25067 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.19■□□□□ 0.02
COL8A2P25067 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC15.19■□□□□ 0.02
COL8A2P25067 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL8A2P25067 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
COL8A2P25067 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
COL8A2P25067 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms