Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.97■□□□□ 0.63
MMP8P22894 AL671277.2-201ENST00000458060 996 ntBASIC18.97■□□□□ 0.63
MMP8P22894 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.97■□□□□ 0.63
MMP8P22894 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.97■□□□□ 0.63
MMP8P22894 LINC01238-205ENST00000567549 1107 ntBASIC18.97■□□□□ 0.63
MMP8P22894 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
MMP8P22894 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MMP8P22894 GPR32P1-201ENST00000601788 811 ntBASIC18.97■□□□□ 0.63
MMP8P22894 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.97■□□□□ 0.63
MMP8P22894 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.97■□□□□ 0.63
MMP8P22894 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
MMP8P22894 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MMP8P22894 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MMP8P22894 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
MMP8P22894 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.97■□□□□ 0.63
MMP8P22894 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.97■□□□□ 0.63
MMP8P22894 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
MMP8P22894 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.97■□□□□ 0.63
MMP8P22894 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MMP8P22894 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
MMP8P22894 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MMP8P22894 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.96■□□□□ 0.63
MMP8P22894 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MMP8P22894 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MMP8P22894 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MMP8P22894 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MMP8P22894 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.96■□□□□ 0.63
MMP8P22894 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.96■□□□□ 0.63
MMP8P22894 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.96■□□□□ 0.63
MMP8P22894 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MMP8P22894 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.96■□□□□ 0.63
MMP8P22894 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
MMP8P22894 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.96■□□□□ 0.63
MMP8P22894 KRT18P21-201ENST00000515767 1272 ntBASIC18.96■□□□□ 0.63
MMP8P22894 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.96■□□□□ 0.63
MMP8P22894 AL390719.2-201ENST00000606993 987 ntBASIC18.96■□□□□ 0.63
MMP8P22894 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.96■□□□□ 0.63
MMP8P22894 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MMP8P22894 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
MMP8P22894 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MMP8P22894 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.96■□□□□ 0.63
MMP8P22894 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.96■□□□□ 0.63
MMP8P22894 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.96■□□□□ 0.63
MMP8P22894 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
MMP8P22894 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
MMP8P22894 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MMP8P22894 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MMP8P22894 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MMP8P22894 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MMP8P22894 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MMP8P22894 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MMP8P22894 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.96■□□□□ 0.63
MMP8P22894 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MMP8P22894 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
MMP8P22894 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.96■□□□□ 0.63
MMP8P22894 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
MMP8P22894 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MMP8P22894 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MMP8P22894 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MMP8P22894 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MMP8P22894 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MMP8P22894 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MMP8P22894 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
MMP8P22894 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MMP8P22894 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MMP8P22894 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.95■□□□□ 0.62
MMP8P22894 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MMP8P22894 TSPY12P-201ENST00000421279 868 ntBASIC18.95■□□□□ 0.62
MMP8P22894 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.95■□□□□ 0.62
MMP8P22894 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MMP8P22894 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.95■□□□□ 0.62
MMP8P22894 RNF126P1-202ENST00000569893 925 ntBASIC18.95■□□□□ 0.62
MMP8P22894 AC005332.3-201ENST00000589904 676 ntBASIC18.95■□□□□ 0.62
MMP8P22894 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
MMP8P22894 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MMP8P22894 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MMP8P22894 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.95■□□□□ 0.62
MMP8P22894 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.95■□□□□ 0.62
MMP8P22894 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
MMP8P22894 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
MMP8P22894 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MMP8P22894 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
MMP8P22894 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP8P22894 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP8P22894 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
MMP8P22894 KRT8P47-201ENST00000604727 1398 ntBASIC18.94■□□□□ 0.62
MMP8P22894 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
MMP8P22894 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MMP8P22894 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.94■□□□□ 0.62
MMP8P22894 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP8P22894 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP8P22894 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP8P22894 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP8P22894 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP8P22894 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MMP8P22894 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP8P22894 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP8P22894 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP8P22894 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP8P22894 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms