Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
NCLP19338 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NCLP19338 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NCLP19338 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.48■■□□□ 1.03
NCLP19338 AP002982.1-201ENST00000492365 877 ntBASIC21.48■■□□□ 1.03
NCLP19338 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NCLP19338 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.48■■□□□ 1.03
NCLP19338 AP003071.4-201ENST00000562276 1284 ntBASIC21.48■■□□□ 1.03
NCLP19338 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
NCLP19338 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.48■■□□□ 1.03
NCLP19338 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.48■■□□□ 1.03
NCLP19338 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.48■■□□□ 1.03
NCLP19338 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NCLP19338 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NCLP19338 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
NCLP19338 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NCLP19338 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NCLP19338 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.48■■□□□ 1.03
NCLP19338 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
NCLP19338 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NCLP19338 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
NCLP19338 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
NCLP19338 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NCLP19338 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NCLP19338 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC21.48■■□□□ 1.03
NCLP19338 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC21.48■■□□□ 1.03
NCLP19338 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NCLP19338 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC21.48■■□□□ 1.03
NCLP19338 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
NCLP19338 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC21.47■■□□□ 1.03
NCLP19338 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NCLP19338 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC21.47■■□□□ 1.03
NCLP19338 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC21.47■■□□□ 1.03
NCLP19338 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NCLP19338 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NCLP19338 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NCLP19338 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NCLP19338 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NCLP19338 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC21.47■■□□□ 1.03
NCLP19338 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NCLP19338 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
NCLP19338 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NCLP19338 NIFKP9-201ENST00000419265 221 ntBASIC21.47■■□□□ 1.03
NCLP19338 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NCLP19338 ECEL1P3-201ENST00000427961 737 ntBASIC21.47■■□□□ 1.03
NCLP19338 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NCLP19338 AL355355.2-201ENST00000442321 338 ntBASIC21.47■■□□□ 1.03
NCLP19338 AC091390.4-202ENST00000476426 537 ntBASIC21.47■■□□□ 1.03
NCLP19338 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
NCLP19338 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.47■■□□□ 1.03
NCLP19338 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.47■■□□□ 1.03
NCLP19338 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.47■■□□□ 1.03
NCLP19338 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NCLP19338 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
NCLP19338 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC21.47■■□□□ 1.03
NCLP19338 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NCLP19338 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NCLP19338 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC21.47■■□□□ 1.03
NCLP19338 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NCLP19338 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
NCLP19338 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC21.47■■□□□ 1.03
NCLP19338 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NCLP19338 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC21.46■■□□□ 1.03
NCLP19338 KRT8P45-201ENST00000414328 1447 ntBASIC21.46■■□□□ 1.03
NCLP19338 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.46■■□□□ 1.03
NCLP19338 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NCLP19338 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
NCLP19338 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.46■■□□□ 1.03
NCLP19338 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.46■■□□□ 1.03
NCLP19338 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NCLP19338 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NCLP19338 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
NCLP19338 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.46■■□□□ 1.03
NCLP19338 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
NCLP19338 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.46■■□□□ 1.03
NCLP19338 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
NCLP19338 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC21.46■■□□□ 1.03
NCLP19338 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NCLP19338 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
NCLP19338 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC21.46■■□□□ 1.03
NCLP19338 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
NCLP19338 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NCLP19338 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
NCLP19338 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
NCLP19338 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NCLP19338 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
NCLP19338 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NCLP19338 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NCLP19338 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.45■■□□□ 1.02
NCLP19338 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NCLP19338 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NCLP19338 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NCLP19338 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NCLP19338 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NCLP19338 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.45■■□□□ 1.02
NCLP19338 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.45■■□□□ 1.02
NCLP19338 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.45■■□□□ 1.02
NCLP19338 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.45■■□□□ 1.02
NCLP19338 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NCLP19338 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms