Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 LINC01311-201ENST00000565162 1445 ntBASIC18.12■□□□□ 0.49
THRAP10827 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
THRAP10827 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
THRAP10827 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
THRAP10827 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
THRAP10827 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
THRAP10827 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
THRAP10827 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
THRAP10827 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
THRAP10827 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
THRAP10827 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
THRAP10827 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.11■□□□□ 0.49
THRAP10827 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
THRAP10827 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
THRAP10827 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.11■□□□□ 0.49
THRAP10827 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
THRAP10827 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
THRAP10827 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
THRAP10827 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
THRAP10827 AL023284.2-201ENST00000405850 579 ntBASIC18.11■□□□□ 0.49
THRAP10827 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
THRAP10827 KRT18P56-201ENST00000507275 550 ntBASIC18.11■□□□□ 0.49
THRAP10827 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.11■□□□□ 0.49
THRAP10827 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
THRAP10827 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.11■□□□□ 0.49
THRAP10827 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
THRAP10827 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.11■□□□□ 0.49
THRAP10827 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
THRAP10827 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
THRAP10827 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
THRAP10827 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.11■□□□□ 0.49
THRAP10827 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
THRAP10827 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
THRAP10827 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
THRAP10827 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.11■□□□□ 0.49
THRAP10827 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
THRAP10827 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
THRAP10827 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.11■□□□□ 0.49
THRAP10827 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
THRAP10827 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
THRAP10827 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.1■□□□□ 0.49
THRAP10827 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
THRAP10827 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.1■□□□□ 0.49
THRAP10827 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
THRAP10827 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
THRAP10827 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.1■□□□□ 0.49
THRAP10827 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.1■□□□□ 0.49
THRAP10827 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.1■□□□□ 0.49
THRAP10827 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
THRAP10827 AC036111.1-201ENST00000533973 1582 ntBASIC18.1■□□□□ 0.49
THRAP10827 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
THRAP10827 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
THRAP10827 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.1■□□□□ 0.49
THRAP10827 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
THRAP10827 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
THRAP10827 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
THRAP10827 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
THRAP10827 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.1■□□□□ 0.49
THRAP10827 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
THRAP10827 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
THRAP10827 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
THRAP10827 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.1■□□□□ 0.49
THRAP10827 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
THRAP10827 AC093458.2-201ENST00000623150 629 ntBASIC18.1■□□□□ 0.49
THRAP10827 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
THRAP10827 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
THRAP10827 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.1■□□□□ 0.49
THRAP10827 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
THRAP10827 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
THRAP10827 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
THRAP10827 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
THRAP10827 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
THRAP10827 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.1■□□□□ 0.49
THRAP10827 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
THRAP10827 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
THRAP10827 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
THRAP10827 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.1■□□□□ 0.49
THRAP10827 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
THRAP10827 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
THRAP10827 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
THRAP10827 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.09■□□□□ 0.49
THRAP10827 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
THRAP10827 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
THRAP10827 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
THRAP10827 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
THRAP10827 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.09■□□□□ 0.49
THRAP10827 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
THRAP10827 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
THRAP10827 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
THRAP10827 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
THRAP10827 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.09■□□□□ 0.49
THRAP10827 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
THRAP10827 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
THRAP10827 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
THRAP10827 KRT8P3-201ENST00000519669 1449 ntBASIC18.09■□□□□ 0.49
THRAP10827 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
THRAP10827 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
THRAP10827 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
THRAP10827 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
THRAP10827 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms