Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CD28P10747 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD28P10747 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD28P10747 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD28P10747 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CD28P10747 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD28P10747 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD28P10747 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.1□□□□□ -0.15
CD28P10747 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.1□□□□□ -0.15
CD28P10747 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.1□□□□□ -0.15
CD28P10747 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.1□□□□□ -0.15
CD28P10747 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.1□□□□□ -0.15
CD28P10747 AC106795.1-205ENST00000512851 1056 ntBASIC14.1□□□□□ -0.15
CD28P10747 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
CD28P10747 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD28P10747 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.1□□□□□ -0.15
CD28P10747 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD28P10747 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.1□□□□□ -0.15
CD28P10747 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CD28P10747 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC14.1□□□□□ -0.15
CD28P10747 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.1□□□□□ -0.15
CD28P10747 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.1□□□□□ -0.15
CD28P10747 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CD28P10747 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD28P10747 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
CD28P10747 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC14.1□□□□□ -0.15
CD28P10747 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC14.1□□□□□ -0.15
CD28P10747 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD28P10747 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC14.1□□□□□ -0.15
CD28P10747 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD28P10747 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD28P10747 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD28P10747 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD28P10747 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CD28P10747 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD28P10747 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
CD28P10747 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD28P10747 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD28P10747 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
CD28P10747 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CD28P10747 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.09□□□□□ -0.15
CD28P10747 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD28P10747 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC14.09□□□□□ -0.15
CD28P10747 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD28P10747 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CD28P10747 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CD28P10747 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD28P10747 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD28P10747 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD28P10747 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD28P10747 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD28P10747 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD28P10747 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC14.09□□□□□ -0.15
CD28P10747 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD28P10747 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD28P10747 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD28P10747 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD28P10747 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD28P10747 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD28P10747 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD28P10747 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD28P10747 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD28P10747 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD28P10747 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD28P10747 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD28P10747 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD28P10747 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD28P10747 AC068472.1-201ENST00000474589 881 ntBASIC14.09□□□□□ -0.15
CD28P10747 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC14.09□□□□□ -0.15
CD28P10747 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.09□□□□□ -0.15
CD28P10747 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CD28P10747 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.09□□□□□ -0.15
CD28P10747 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CD28P10747 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.09□□□□□ -0.15
CD28P10747 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD28P10747 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD28P10747 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CD28P10747 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC14.09□□□□□ -0.15
CD28P10747 LINC00602-201ENST00000629776 2065 ntBASIC14.09□□□□□ -0.15
CD28P10747 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD28P10747 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD28P10747 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD28P10747 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC14.09□□□□□ -0.15
CD28P10747 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD28P10747 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CD28P10747 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.09□□□□□ -0.15
CD28P10747 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD28P10747 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD28P10747 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD28P10747 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CD28P10747 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD28P10747 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC14.09□□□□□ -0.15
CD28P10747 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD28P10747 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
CD28P10747 TNXA-203ENST00000507684 2038 ntBASIC14.08□□□□□ -0.15
CD28P10747 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CD28P10747 AC005082.1-201ENST00000413042 2259 ntBASIC14.08□□□□□ -0.15
CD28P10747 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CD28P10747 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD28P10747 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms