Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC25.84■■□□□ 1.73
CHGAP10645 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC25.84■■□□□ 1.73
CHGAP10645 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC25.84■■□□□ 1.73
CHGAP10645 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC25.84■■□□□ 1.73
CHGAP10645 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC25.84■■□□□ 1.73
CHGAP10645 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC25.84■■□□□ 1.73
CHGAP10645 SDCCAG3P1-201ENST00000589292 1150 ntBASIC25.84■■□□□ 1.73
CHGAP10645 ANO7L1-203ENST00000602586 1720 ntBASIC25.84■■□□□ 1.73
CHGAP10645 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
CHGAP10645 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CHGAP10645 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CHGAP10645 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC25.84■■□□□ 1.73
CHGAP10645 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC25.83■■□□□ 1.73
CHGAP10645 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CHGAP10645 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC25.83■■□□□ 1.73
CHGAP10645 GMCL1P1-201ENST00000463439 1581 ntBASIC25.83■■□□□ 1.73
CHGAP10645 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
CHGAP10645 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC25.83■■□□□ 1.73
CHGAP10645 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CHGAP10645 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CHGAP10645 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CHGAP10645 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
CHGAP10645 AC079776.2-201ENST00000641154 1609 ntBASIC25.83■■□□□ 1.73
CHGAP10645 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
CHGAP10645 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC25.83■■□□□ 1.73
CHGAP10645 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC25.83■■□□□ 1.73
CHGAP10645 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CHGAP10645 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CHGAP10645 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CHGAP10645 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.72
CHGAP10645 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC25.83■■□□□ 1.72
CHGAP10645 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CHGAP10645 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
CHGAP10645 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CHGAP10645 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CHGAP10645 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CHGAP10645 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
CHGAP10645 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
CHGAP10645 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC25.82■■□□□ 1.72
CHGAP10645 PMP22-202ENST00000395936 816 ntTSL 3 BASIC25.82■■□□□ 1.72
CHGAP10645 KIRREL3-AS3-201ENST00000404882 831 ntBASIC25.82■■□□□ 1.72
CHGAP10645 DNAJB3-201ENST00000446806 729 ntBASIC25.82■■□□□ 1.72
CHGAP10645 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CHGAP10645 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CHGAP10645 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CHGAP10645 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CHGAP10645 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CHGAP10645 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CHGAP10645 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
CHGAP10645 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
CHGAP10645 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
CHGAP10645 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
CHGAP10645 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CHGAP10645 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CHGAP10645 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CHGAP10645 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CHGAP10645 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
CHGAP10645 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
CHGAP10645 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CHGAP10645 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC25.81■■□□□ 1.72
CHGAP10645 PMS2P2-201ENST00000425039 1128 ntBASIC25.81■■□□□ 1.72
CHGAP10645 CRCP-205ENST00000431089 942 ntTSL 2 BASIC25.81■■□□□ 1.72
CHGAP10645 HMGN1P19-201ENST00000436976 333 ntBASIC25.81■■□□□ 1.72
CHGAP10645 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC25.81■■□□□ 1.72
CHGAP10645 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CHGAP10645 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC25.81■■□□□ 1.72
CHGAP10645 AL022326.1-202ENST00000641533 845 ntBASIC25.81■■□□□ 1.72
CHGAP10645 AC134684.3-201ENST00000641758 218 ntBASIC25.81■■□□□ 1.72
CHGAP10645 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CHGAP10645 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC25.81■■□□□ 1.72
CHGAP10645 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
CHGAP10645 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CHGAP10645 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CHGAP10645 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC25.81■■□□□ 1.72
CHGAP10645 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
CHGAP10645 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC25.8■■□□□ 1.72
CHGAP10645 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
CHGAP10645 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CHGAP10645 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC25.8■■□□□ 1.72
CHGAP10645 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CHGAP10645 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
CHGAP10645 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC25.8■■□□□ 1.72
CHGAP10645 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC25.8■■□□□ 1.72
CHGAP10645 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CHGAP10645 BEX3-201ENST00000361298 921 ntTSL 2 BASIC25.8■■□□□ 1.72
CHGAP10645 AC004967.1-201ENST00000453589 447 ntBASIC25.8■■□□□ 1.72
CHGAP10645 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
CHGAP10645 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC25.8■■□□□ 1.72
CHGAP10645 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC25.8■■□□□ 1.72
CHGAP10645 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC25.8■■□□□ 1.72
CHGAP10645 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC25.8■■□□□ 1.72
CHGAP10645 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC25.8■■□□□ 1.72
CHGAP10645 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CHGAP10645 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC25.8■■□□□ 1.72
CHGAP10645 AC010460.3-201ENST00000511359 1579 ntBASIC25.8■■□□□ 1.72
CHGAP10645 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CHGAP10645 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CHGAP10645 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CHGAP10645 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC25.8■■□□□ 1.72
CHGAP10645 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC25.8■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms