Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.78■□□□□ 0.44
CAPN1P07384 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CAPN1P07384 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CAPN1P07384 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.78■□□□□ 0.44
CAPN1P07384 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CAPN1P07384 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.77■□□□□ 0.44
CAPN1P07384 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.77■□□□□ 0.44
CAPN1P07384 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CAPN1P07384 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CAPN1P07384 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CAPN1P07384 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
CAPN1P07384 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CAPN1P07384 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.44
CAPN1P07384 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.77■□□□□ 0.44
CAPN1P07384 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.77■□□□□ 0.44
CAPN1P07384 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CAPN1P07384 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CAPN1P07384 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CAPN1P07384 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CAPN1P07384 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CAPN1P07384 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CAPN1P07384 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
CAPN1P07384 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CAPN1P07384 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.77■□□□□ 0.44
CAPN1P07384 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
CAPN1P07384 HOXB1-202ENST00000577092 1414 ntBASIC17.77■□□□□ 0.44
CAPN1P07384 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CAPN1P07384 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.77■□□□□ 0.44
CAPN1P07384 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CAPN1P07384 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.77■□□□□ 0.44
CAPN1P07384 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CAPN1P07384 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.77■□□□□ 0.43
CAPN1P07384 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CAPN1P07384 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CAPN1P07384 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CAPN1P07384 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CAPN1P07384 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CAPN1P07384 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.77■□□□□ 0.43
CAPN1P07384 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CAPN1P07384 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.77■□□□□ 0.43
CAPN1P07384 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CAPN1P07384 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CAPN1P07384 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CAPN1P07384 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CAPN1P07384 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.76■□□□□ 0.43
CAPN1P07384 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.76■□□□□ 0.43
CAPN1P07384 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CAPN1P07384 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CAPN1P07384 AC009102.3-201ENST00000623118 1491 ntBASIC17.76■□□□□ 0.43
CAPN1P07384 AC005332.1-201ENST00000577698 1310 ntBASIC17.76■□□□□ 0.43
CAPN1P07384 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CAPN1P07384 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CAPN1P07384 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CAPN1P07384 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CAPN1P07384 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CAPN1P07384 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
CAPN1P07384 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.76■□□□□ 0.43
CAPN1P07384 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.76■□□□□ 0.43
CAPN1P07384 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.76■□□□□ 0.43
CAPN1P07384 SPDYE15P-201ENST00000424157 909 ntBASIC17.76■□□□□ 0.43
CAPN1P07384 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CAPN1P07384 KRT18P23-201ENST00000435622 1283 ntBASIC17.76■□□□□ 0.43
CAPN1P07384 AC112907.2-201ENST00000448639 330 ntBASIC17.76■□□□□ 0.43
CAPN1P07384 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.76■□□□□ 0.43
CAPN1P07384 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.76■□□□□ 0.43
CAPN1P07384 AC083849.1-201ENST00000615227 514 ntBASIC17.76■□□□□ 0.43
CAPN1P07384 AC116407.4-201ENST00000623319 1061 ntBASIC17.76■□□□□ 0.43
CAPN1P07384 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.76■□□□□ 0.43
CAPN1P07384 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CAPN1P07384 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CAPN1P07384 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CAPN1P07384 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.76■□□□□ 0.43
CAPN1P07384 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.76■□□□□ 0.43
CAPN1P07384 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
CAPN1P07384 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CAPN1P07384 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CAPN1P07384 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CAPN1P07384 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CAPN1P07384 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CAPN1P07384 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CAPN1P07384 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CAPN1P07384 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CAPN1P07384 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CAPN1P07384 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CAPN1P07384 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CAPN1P07384 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.75■□□□□ 0.43
CAPN1P07384 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CAPN1P07384 MIR149-201ENST00000384879 89 ntBASIC17.75■□□□□ 0.43
CAPN1P07384 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.75■□□□□ 0.43
CAPN1P07384 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CAPN1P07384 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.75■□□□□ 0.43
CAPN1P07384 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CAPN1P07384 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.75■□□□□ 0.43
CAPN1P07384 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.75■□□□□ 0.43
CAPN1P07384 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.75■□□□□ 0.43
CAPN1P07384 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CAPN1P07384 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CAPN1P07384 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CAPN1P07384 FLJ13224-201ENST00000313737 1514 ntBASIC17.75■□□□□ 0.43
CAPN1P07384 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms