Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MBD3O95983 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MBD3O95983 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MBD3O95983 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
MBD3O95983 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.7■□□□□ 0.9
MBD3O95983 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20.7■□□□□ 0.9
MBD3O95983 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MBD3O95983 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.7■□□□□ 0.9
MBD3O95983 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.69■□□□□ 0.9
MBD3O95983 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.69■□□□□ 0.9
MBD3O95983 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
MBD3O95983 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
MBD3O95983 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
MBD3O95983 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
MBD3O95983 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MBD3O95983 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
MBD3O95983 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.69■□□□□ 0.9
MBD3O95983 AC133681.1-201ENST00000465482 601 ntBASIC20.69■□□□□ 0.9
MBD3O95983 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
MBD3O95983 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.69■□□□□ 0.9
MBD3O95983 AC124016.1-201ENST00000609552 612 ntBASIC20.69■□□□□ 0.9
MBD3O95983 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MBD3O95983 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MBD3O95983 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MBD3O95983 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MBD3O95983 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MBD3O95983 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MBD3O95983 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC20.69■□□□□ 0.9
MBD3O95983 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MBD3O95983 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC20.69■□□□□ 0.9
MBD3O95983 HOXB1-202ENST00000577092 1414 ntBASIC20.69■□□□□ 0.9
MBD3O95983 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC20.69■□□□□ 0.9
MBD3O95983 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC20.69■□□□□ 0.9
MBD3O95983 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
MBD3O95983 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MBD3O95983 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MBD3O95983 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
MBD3O95983 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
MBD3O95983 HLA-J-201ENST00000462773 1622 ntBASIC20.68■□□□□ 0.9
MBD3O95983 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.68■□□□□ 0.9
MBD3O95983 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MBD3O95983 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MBD3O95983 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MBD3O95983 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
MBD3O95983 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MBD3O95983 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
MBD3O95983 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.68■□□□□ 0.9
MBD3O95983 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.68■□□□□ 0.9
MBD3O95983 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.68■□□□□ 0.9
MBD3O95983 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MBD3O95983 AC110285.5-201ENST00000611501 352 ntBASIC20.68■□□□□ 0.9
MBD3O95983 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
MBD3O95983 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MBD3O95983 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MBD3O95983 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
MBD3O95983 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.68■□□□□ 0.9
MBD3O95983 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MBD3O95983 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MBD3O95983 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.68■□□□□ 0.9
MBD3O95983 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MBD3O95983 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
MBD3O95983 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.68■□□□□ 0.9
MBD3O95983 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.68■□□□□ 0.9
MBD3O95983 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MBD3O95983 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
MBD3O95983 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
MBD3O95983 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MBD3O95983 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MBD3O95983 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
MBD3O95983 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MBD3O95983 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MBD3O95983 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
MBD3O95983 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
MBD3O95983 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MBD3O95983 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MBD3O95983 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MBD3O95983 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.67■□□□□ 0.9
MBD3O95983 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.67■□□□□ 0.9
MBD3O95983 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MBD3O95983 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MBD3O95983 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MBD3O95983 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
MBD3O95983 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
MBD3O95983 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC20.67■□□□□ 0.9
MBD3O95983 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MBD3O95983 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.67■□□□□ 0.9
MBD3O95983 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MBD3O95983 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
MBD3O95983 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
MBD3O95983 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
MBD3O95983 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.67■□□□□ 0.9
MBD3O95983 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.67■□□□□ 0.9
MBD3O95983 AC100803.2-201ENST00000562459 1963 ntBASIC20.66■□□□□ 0.9
MBD3O95983 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.66■□□□□ 0.9
MBD3O95983 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MBD3O95983 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
MBD3O95983 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
MBD3O95983 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MBD3O95983 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC20.66■□□□□ 0.9
MBD3O95983 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms