Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PPP1R3DO95685 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.32■□□□□ 0.2
PPP1R3DO95685 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PPP1R3DO95685 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PPP1R3DO95685 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.32■□□□□ 0.2
PPP1R3DO95685 SNORA78-201ENST00000459373 127 ntBASIC16.32■□□□□ 0.2
PPP1R3DO95685 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.32■□□□□ 0.2
PPP1R3DO95685 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.32■□□□□ 0.2
PPP1R3DO95685 AL355075.4-201ENST00000554988 638 ntBASIC16.32■□□□□ 0.2
PPP1R3DO95685 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PPP1R3DO95685 MIR3180-4-201ENST00000582223 153 ntBASIC16.32■□□□□ 0.2
PPP1R3DO95685 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
PPP1R3DO95685 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PPP1R3DO95685 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.32■□□□□ 0.2
PPP1R3DO95685 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PPP1R3DO95685 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PPP1R3DO95685 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PPP1R3DO95685 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PPP1R3DO95685 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PPP1R3DO95685 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.32■□□□□ 0.2
PPP1R3DO95685 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PPP1R3DO95685 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PPP1R3DO95685 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PPP1R3DO95685 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.32■□□□□ 0.2
PPP1R3DO95685 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PPP1R3DO95685 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.31■□□□□ 0.2
PPP1R3DO95685 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PPP1R3DO95685 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PPP1R3DO95685 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.31■□□□□ 0.2
PPP1R3DO95685 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PPP1R3DO95685 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.31■□□□□ 0.2
PPP1R3DO95685 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PPP1R3DO95685 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PPP1R3DO95685 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PPP1R3DO95685 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PPP1R3DO95685 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PPP1R3DO95685 INGX-201ENST00000359239 846 ntBASIC16.31■□□□□ 0.2
PPP1R3DO95685 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PPP1R3DO95685 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PPP1R3DO95685 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.31■□□□□ 0.2
PPP1R3DO95685 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PPP1R3DO95685 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.31■□□□□ 0.2
PPP1R3DO95685 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PPP1R3DO95685 AC010653.2-201ENST00000623505 997 ntBASIC16.31■□□□□ 0.2
PPP1R3DO95685 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PPP1R3DO95685 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.31■□□□□ 0.2
PPP1R3DO95685 AC066615.1-201ENST00000640911 628 ntBASIC16.31■□□□□ 0.2
PPP1R3DO95685 AP006294.2-201ENST00000641667 209 ntBASIC16.31■□□□□ 0.2
PPP1R3DO95685 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PPP1R3DO95685 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PPP1R3DO95685 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PPP1R3DO95685 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PPP1R3DO95685 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.31■□□□□ 0.2
PPP1R3DO95685 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PPP1R3DO95685 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PPP1R3DO95685 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.31■□□□□ 0.2
PPP1R3DO95685 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PPP1R3DO95685 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PPP1R3DO95685 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
PPP1R3DO95685 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PPP1R3DO95685 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PPP1R3DO95685 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PPP1R3DO95685 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PPP1R3DO95685 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PPP1R3DO95685 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PPP1R3DO95685 AC139713.2-201ENST00000641328 2723 ntBASIC16.3■□□□□ 0.2
PPP1R3DO95685 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.3■□□□□ 0.2
PPP1R3DO95685 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PPP1R3DO95685 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PPP1R3DO95685 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.3■□□□□ 0.2
PPP1R3DO95685 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PPP1R3DO95685 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PPP1R3DO95685 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
PPP1R3DO95685 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.3■□□□□ 0.2
PPP1R3DO95685 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.3■□□□□ 0.2
PPP1R3DO95685 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.3■□□□□ 0.2
PPP1R3DO95685 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PPP1R3DO95685 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PPP1R3DO95685 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PPP1R3DO95685 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PPP1R3DO95685 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
PPP1R3DO95685 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PPP1R3DO95685 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
PPP1R3DO95685 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.3■□□□□ 0.2
PPP1R3DO95685 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PPP1R3DO95685 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.3■□□□□ 0.2
PPP1R3DO95685 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPP1R3DO95685 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PPP1R3DO95685 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PPP1R3DO95685 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PPP1R3DO95685 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PPP1R3DO95685 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPP1R3DO95685 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
PPP1R3DO95685 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
PPP1R3DO95685 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPP1R3DO95685 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPP1R3DO95685 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPP1R3DO95685 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PPP1R3DO95685 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPP1R3DO95685 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms