Protein–RNA interactions for Protein: O95390

GDF11, Growth/differentiation factor 11, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF11O95390 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GDF11O95390 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GDF11O95390 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
GDF11O95390 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
GDF11O95390 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
GDF11O95390 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
GDF11O95390 CSF3-203ENST00000394148 622 ntTSL 3 BASIC21.01■□□□□ 0.95
GDF11O95390 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC21.01■□□□□ 0.95
GDF11O95390 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
GDF11O95390 RPL13AP23-201ENST00000480739 586 ntBASIC21.01■□□□□ 0.95
GDF11O95390 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC21.01■□□□□ 0.95
GDF11O95390 AC106730.1-201ENST00000566722 1090 ntBASIC21.01■□□□□ 0.95
GDF11O95390 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC21.01■□□□□ 0.95
GDF11O95390 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC21.01■□□□□ 0.95
GDF11O95390 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC21.01■□□□□ 0.95
GDF11O95390 GPALPP1-207ENST00000611650 899 ntBASIC21.01■□□□□ 0.95
GDF11O95390 AC006538.3-201ENST00000612495 578 ntBASIC21.01■□□□□ 0.95
GDF11O95390 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
GDF11O95390 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GDF11O95390 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
GDF11O95390 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GDF11O95390 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC21.01■□□□□ 0.95
GDF11O95390 AC010460.3-201ENST00000511359 1579 ntBASIC21.01■□□□□ 0.95
GDF11O95390 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
GDF11O95390 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GDF11O95390 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GDF11O95390 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
GDF11O95390 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GDF11O95390 SP100-208ENST00000427101 1922 ntTSL 2 BASIC21■□□□□ 0.95
GDF11O95390 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21■□□□□ 0.95
GDF11O95390 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GDF11O95390 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC21■□□□□ 0.95
GDF11O95390 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21■□□□□ 0.95
GDF11O95390 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21■□□□□ 0.95
GDF11O95390 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
GDF11O95390 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GDF11O95390 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
GDF11O95390 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC21■□□□□ 0.95
GDF11O95390 FAM220CP-201ENST00000395253 831 ntBASIC21■□□□□ 0.95
GDF11O95390 MIR940-201ENST00000401276 94 ntBASIC21■□□□□ 0.95
GDF11O95390 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC21■□□□□ 0.95
GDF11O95390 AC012640.2-201ENST00000561606 901 ntBASIC21■□□□□ 0.95
GDF11O95390 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC21■□□□□ 0.95
GDF11O95390 PNMT-203ENST00000581428 677 ntTSL 2 BASIC21■□□□□ 0.95
GDF11O95390 NKAPP1-205ENST00000585790 367 ntBASIC21■□□□□ 0.95
GDF11O95390 AC025062.2-201ENST00000605477 670 ntBASIC21■□□□□ 0.95
GDF11O95390 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC21■□□□□ 0.95
GDF11O95390 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC21■□□□□ 0.95
GDF11O95390 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
GDF11O95390 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
GDF11O95390 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GDF11O95390 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC21■□□□□ 0.95
GDF11O95390 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
GDF11O95390 AC073592.3-201ENST00000625118 1834 ntBASIC20.99■□□□□ 0.95
GDF11O95390 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GDF11O95390 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.99■□□□□ 0.95
GDF11O95390 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GDF11O95390 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
GDF11O95390 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GDF11O95390 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GDF11O95390 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GDF11O95390 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GDF11O95390 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GDF11O95390 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.99■□□□□ 0.95
GDF11O95390 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GDF11O95390 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
GDF11O95390 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
GDF11O95390 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GDF11O95390 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GDF11O95390 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.99■□□□□ 0.95
GDF11O95390 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GDF11O95390 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GDF11O95390 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
GDF11O95390 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
GDF11O95390 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.99■□□□□ 0.95
GDF11O95390 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
GDF11O95390 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.98■□□□□ 0.95
GDF11O95390 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GDF11O95390 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GDF11O95390 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
GDF11O95390 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
GDF11O95390 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
GDF11O95390 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GDF11O95390 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GDF11O95390 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.98■□□□□ 0.95
GDF11O95390 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.98■□□□□ 0.95
GDF11O95390 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GDF11O95390 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
GDF11O95390 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.98■□□□□ 0.95
GDF11O95390 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.98■□□□□ 0.95
GDF11O95390 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.98■□□□□ 0.95
GDF11O95390 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.98■□□□□ 0.95
GDF11O95390 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
GDF11O95390 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.98■□□□□ 0.95
GDF11O95390 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GDF11O95390 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
GDF11O95390 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
GDF11O95390 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
GDF11O95390 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GDF11O95390 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms