Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
USP1O94782 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
USP1O94782 AC087499.1-201ENST00000418141 1075 ntBASIC18.27■□□□□ 0.52
USP1O94782 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.27■□□□□ 0.52
USP1O94782 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.27■□□□□ 0.52
USP1O94782 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.27■□□□□ 0.52
USP1O94782 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.27■□□□□ 0.52
USP1O94782 AC024243.1-201ENST00000609234 778 ntBASIC18.27■□□□□ 0.52
USP1O94782 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
USP1O94782 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
USP1O94782 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
USP1O94782 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
USP1O94782 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
USP1O94782 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
USP1O94782 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.27■□□□□ 0.51
USP1O94782 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
USP1O94782 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
USP1O94782 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
USP1O94782 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP1O94782 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
USP1O94782 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP1O94782 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
USP1O94782 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP1O94782 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP1O94782 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP1O94782 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.26■□□□□ 0.51
USP1O94782 AC006116.8-202ENST00000587620 1550 ntBASIC18.26■□□□□ 0.51
USP1O94782 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP1O94782 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP1O94782 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP1O94782 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP1O94782 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP1O94782 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.26■□□□□ 0.51
USP1O94782 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP1O94782 ECEL1P2-202ENST00000465689 757 ntBASIC18.26■□□□□ 0.51
USP1O94782 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
USP1O94782 AC133561.5-201ENST00000635547 218 ntBASIC18.26■□□□□ 0.51
USP1O94782 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP1O94782 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP1O94782 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP1O94782 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP1O94782 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP1O94782 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP1O94782 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP1O94782 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
USP1O94782 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
USP1O94782 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
USP1O94782 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP1O94782 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP1O94782 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP1O94782 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP1O94782 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.25■□□□□ 0.51
USP1O94782 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP1O94782 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.25■□□□□ 0.51
USP1O94782 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
USP1O94782 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.25■□□□□ 0.51
USP1O94782 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP1O94782 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
USP1O94782 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP1O94782 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
USP1O94782 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
USP1O94782 PCDHA12-202ENST00000613593 2588 ntBASIC18.25■□□□□ 0.51
USP1O94782 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
USP1O94782 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
USP1O94782 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP1O94782 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP1O94782 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
USP1O94782 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP1O94782 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
USP1O94782 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
USP1O94782 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.25■□□□□ 0.51
USP1O94782 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.25■□□□□ 0.51
USP1O94782 DUTP2-201ENST00000519164 463 ntBASIC18.25■□□□□ 0.51
USP1O94782 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.25■□□□□ 0.51
USP1O94782 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP1O94782 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.25■□□□□ 0.51
USP1O94782 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
USP1O94782 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.25■□□□□ 0.51
USP1O94782 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP1O94782 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP1O94782 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
USP1O94782 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP1O94782 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP1O94782 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP1O94782 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
USP1O94782 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.24■□□□□ 0.51
USP1O94782 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP1O94782 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP1O94782 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
USP1O94782 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
USP1O94782 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP1O94782 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.24■□□□□ 0.51
USP1O94782 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
USP1O94782 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP1O94782 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.24■□□□□ 0.51
USP1O94782 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
USP1O94782 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.24■□□□□ 0.51
USP1O94782 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.24■□□□□ 0.51
USP1O94782 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP1O94782 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms