Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDKL5O76039 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDKL5O76039 TMPOP1-202ENST00000424642 1267 ntBASIC20.99■□□□□ 0.95
CDKL5O76039 KRT18P65-201ENST00000439811 1286 ntBASIC20.99■□□□□ 0.95
CDKL5O76039 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDKL5O76039 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.99■□□□□ 0.95
CDKL5O76039 ZNF444P1-201ENST00000559497 298 ntBASIC20.99■□□□□ 0.95
CDKL5O76039 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.99■□□□□ 0.95
CDKL5O76039 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDKL5O76039 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDKL5O76039 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDKL5O76039 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.99■□□□□ 0.95
CDKL5O76039 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDKL5O76039 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDKL5O76039 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
CDKL5O76039 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDKL5O76039 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
CDKL5O76039 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CDKL5O76039 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDKL5O76039 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDKL5O76039 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDKL5O76039 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDKL5O76039 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDKL5O76039 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDKL5O76039 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDKL5O76039 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CDKL5O76039 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.98■□□□□ 0.95
CDKL5O76039 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDKL5O76039 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDKL5O76039 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDKL5O76039 MIR662-201ENST00000384847 95 ntBASIC20.98■□□□□ 0.95
CDKL5O76039 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.98■□□□□ 0.95
CDKL5O76039 AC022616.7-201ENST00000525383 220 ntBASIC20.98■□□□□ 0.95
CDKL5O76039 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.98■□□□□ 0.95
CDKL5O76039 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.98■□□□□ 0.95
CDKL5O76039 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.98■□□□□ 0.95
CDKL5O76039 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.98■□□□□ 0.95
CDKL5O76039 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.98■□□□□ 0.95
CDKL5O76039 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.98■□□□□ 0.95
CDKL5O76039 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDKL5O76039 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CDKL5O76039 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.98■□□□□ 0.95
CDKL5O76039 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.98■□□□□ 0.95
CDKL5O76039 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.98■□□□□ 0.95
CDKL5O76039 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.98■□□□□ 0.95
CDKL5O76039 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDKL5O76039 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDKL5O76039 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDKL5O76039 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDKL5O76039 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
CDKL5O76039 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDKL5O76039 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDKL5O76039 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CDKL5O76039 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.97■□□□□ 0.95
CDKL5O76039 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDKL5O76039 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CDKL5O76039 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.97■□□□□ 0.95
CDKL5O76039 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDKL5O76039 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDKL5O76039 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDKL5O76039 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.97■□□□□ 0.95
CDKL5O76039 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDKL5O76039 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDKL5O76039 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.97■□□□□ 0.95
CDKL5O76039 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.97■□□□□ 0.95
CDKL5O76039 DUX4L26-201ENST00000489078 1255 ntBASIC20.97■□□□□ 0.95
CDKL5O76039 AP003733.1-201ENST00000491725 852 ntBASIC20.97■□□□□ 0.95
CDKL5O76039 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.97■□□□□ 0.95
CDKL5O76039 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDKL5O76039 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDKL5O76039 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDKL5O76039 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDKL5O76039 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDKL5O76039 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDKL5O76039 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDKL5O76039 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDKL5O76039 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDKL5O76039 LINC01311-201ENST00000565162 1445 ntBASIC20.96■□□□□ 0.95
CDKL5O76039 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.96■□□□□ 0.95
CDKL5O76039 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
CDKL5O76039 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDKL5O76039 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.96■□□□□ 0.95
CDKL5O76039 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CDKL5O76039 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDKL5O76039 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDKL5O76039 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDKL5O76039 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDKL5O76039 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDKL5O76039 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.96■□□□□ 0.95
CDKL5O76039 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDKL5O76039 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.96■□□□□ 0.95
CDKL5O76039 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.96■□□□□ 0.95
CDKL5O76039 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.96■□□□□ 0.95
CDKL5O76039 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.96■□□□□ 0.95
CDKL5O76039 HYMAI.1-201ENST00000620949 238 ntBASIC20.96■□□□□ 0.95
CDKL5O76039 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDKL5O76039 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDKL5O76039 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDKL5O76039 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDKL5O76039 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms