Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLN5O75503 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLN5O75503 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CLN5O75503 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CLN5O75503 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLN5O75503 UBALD1-205ENST00000590891 2641 ntBASIC14.76□□□□□ -0.05
CLN5O75503 AL136379.1-201ENST00000623471 2642 ntBASIC14.76□□□□□ -0.05
CLN5O75503 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.76□□□□□ -0.05
CLN5O75503 AC134043.2-201ENST00000624206 2238 ntBASIC14.76□□□□□ -0.05
CLN5O75503 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLN5O75503 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CLN5O75503 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
CLN5O75503 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLN5O75503 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLN5O75503 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLN5O75503 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLN5O75503 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLN5O75503 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CLN5O75503 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLN5O75503 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.75□□□□□ -0.05
CLN5O75503 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLN5O75503 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLN5O75503 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC14.75□□□□□ -0.05
CLN5O75503 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLN5O75503 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CLN5O75503 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLN5O75503 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLN5O75503 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLN5O75503 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CLN5O75503 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLN5O75503 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLN5O75503 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLN5O75503 PTPA-216ENST00000432651 857 ntTSL 2 BASIC14.75□□□□□ -0.05
CLN5O75503 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC14.75□□□□□ -0.05
CLN5O75503 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC14.75□□□□□ -0.05
CLN5O75503 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
CLN5O75503 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.75□□□□□ -0.05
CLN5O75503 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC14.75□□□□□ -0.05
CLN5O75503 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC14.75□□□□□ -0.05
CLN5O75503 AC124016.1-201ENST00000609552 612 ntBASIC14.75□□□□□ -0.05
CLN5O75503 AC131212.4-201ENST00000623606 975 ntBASIC14.75□□□□□ -0.05
CLN5O75503 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLN5O75503 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLN5O75503 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.75□□□□□ -0.05
CLN5O75503 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLN5O75503 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC14.75□□□□□ -0.05
CLN5O75503 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC14.75□□□□□ -0.05
CLN5O75503 CROCCP2-202ENST00000412962 2773 ntBASIC14.75□□□□□ -0.05
CLN5O75503 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLN5O75503 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC14.75□□□□□ -0.05
CLN5O75503 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLN5O75503 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.75□□□□□ -0.05
CLN5O75503 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CLN5O75503 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
CLN5O75503 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
CLN5O75503 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC14.75□□□□□ -0.05
CLN5O75503 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CLN5O75503 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLN5O75503 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CLN5O75503 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLN5O75503 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLN5O75503 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC14.74□□□□□ -0.05
CLN5O75503 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLN5O75503 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CLN5O75503 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLN5O75503 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLN5O75503 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLN5O75503 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLN5O75503 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLN5O75503 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLN5O75503 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.74□□□□□ -0.05
CLN5O75503 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLN5O75503 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CLN5O75503 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC14.74□□□□□ -0.05
CLN5O75503 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC14.74□□□□□ -0.05
CLN5O75503 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLN5O75503 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CLN5O75503 POU5F1P3-201ENST00000428824 1078 ntBASIC14.74□□□□□ -0.05
CLN5O75503 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC14.74□□□□□ -0.05
CLN5O75503 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC14.74□□□□□ -0.05
CLN5O75503 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC14.74□□□□□ -0.05
CLN5O75503 RN7SL471P-201ENST00000580476 299 ntBASIC14.74□□□□□ -0.05
CLN5O75503 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC14.74□□□□□ -0.05
CLN5O75503 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC14.74□□□□□ -0.05
CLN5O75503 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLN5O75503 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLN5O75503 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLN5O75503 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLN5O75503 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLN5O75503 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CLN5O75503 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLN5O75503 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLN5O75503 KATNBL1P6-202ENST00000562413 1466 ntBASIC14.74□□□□□ -0.05
CLN5O75503 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLN5O75503 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLN5O75503 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLN5O75503 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CLN5O75503 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLN5O75503 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.74□□□□□ -0.05
CLN5O75503 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms