Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.24■□□□□ 0.51
CDH16O75309 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH16O75309 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH16O75309 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH16O75309 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH16O75309 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH16O75309 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH16O75309 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CDH16O75309 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDH16O75309 DUTP2-201ENST00000519164 463 ntBASIC18.24■□□□□ 0.51
CDH16O75309 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
CDH16O75309 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.24■□□□□ 0.51
CDH16O75309 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.24■□□□□ 0.51
CDH16O75309 AC073648.6-201ENST00000641589 218 ntBASIC18.24■□□□□ 0.51
CDH16O75309 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH16O75309 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH16O75309 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH16O75309 FSCN1P1-201ENST00000568912 1481 ntBASIC18.24■□□□□ 0.51
CDH16O75309 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDH16O75309 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CDH16O75309 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDH16O75309 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH16O75309 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH16O75309 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDH16O75309 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH16O75309 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDH16O75309 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH16O75309 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CDH16O75309 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH16O75309 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH16O75309 KRT8P7-201ENST00000533003 1432 ntBASIC18.23■□□□□ 0.51
CDH16O75309 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.23■□□□□ 0.51
CDH16O75309 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.23■□□□□ 0.51
CDH16O75309 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDH16O75309 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH16O75309 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CDH16O75309 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH16O75309 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.23■□□□□ 0.51
CDH16O75309 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDH16O75309 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.23■□□□□ 0.51
CDH16O75309 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.23■□□□□ 0.51
CDH16O75309 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.23■□□□□ 0.51
CDH16O75309 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
CDH16O75309 RN7SL471P-201ENST00000580476 299 ntBASIC18.23■□□□□ 0.51
CDH16O75309 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH16O75309 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH16O75309 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH16O75309 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CDH16O75309 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CDH16O75309 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH16O75309 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.23■□□□□ 0.51
CDH16O75309 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.23■□□□□ 0.51
CDH16O75309 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.23■□□□□ 0.51
CDH16O75309 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH16O75309 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.23■□□□□ 0.51
CDH16O75309 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.23■□□□□ 0.51
CDH16O75309 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.23■□□□□ 0.51
CDH16O75309 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.23■□□□□ 0.51
CDH16O75309 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDH16O75309 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDH16O75309 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDH16O75309 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CDH16O75309 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.22■□□□□ 0.51
CDH16O75309 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH16O75309 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH16O75309 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH16O75309 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDH16O75309 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDH16O75309 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.22■□□□□ 0.51
CDH16O75309 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH16O75309 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH16O75309 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CDH16O75309 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH16O75309 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.22■□□□□ 0.51
CDH16O75309 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDH16O75309 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.22■□□□□ 0.51
CDH16O75309 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.22■□□□□ 0.51
CDH16O75309 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.22■□□□□ 0.51
CDH16O75309 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.22■□□□□ 0.51
CDH16O75309 AC073195.1-201ENST00000607241 877 ntBASIC18.22■□□□□ 0.51
CDH16O75309 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH16O75309 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH16O75309 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.22■□□□□ 0.51
CDH16O75309 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH16O75309 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.22■□□□□ 0.51
CDH16O75309 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH16O75309 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CDH16O75309 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH16O75309 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.22■□□□□ 0.51
CDH16O75309 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.22■□□□□ 0.51
CDH16O75309 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDH16O75309 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH16O75309 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDH16O75309 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDH16O75309 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH16O75309 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
CDH16O75309 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDH16O75309 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH16O75309 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDH16O75309 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms