Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.32■□□□□ 0.36
CPNE3O75131 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.32■□□□□ 0.36
CPNE3O75131 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CPNE3O75131 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CPNE3O75131 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.32■□□□□ 0.36
CPNE3O75131 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.32■□□□□ 0.36
CPNE3O75131 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE3O75131 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CPNE3O75131 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE3O75131 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.32■□□□□ 0.36
CPNE3O75131 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE3O75131 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.32■□□□□ 0.36
CPNE3O75131 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE3O75131 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE3O75131 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE3O75131 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE3O75131 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.31■□□□□ 0.36
CPNE3O75131 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE3O75131 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.31■□□□□ 0.36
CPNE3O75131 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE3O75131 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE3O75131 LINC00167-201ENST00000530583 1419 ntBASIC17.31■□□□□ 0.36
CPNE3O75131 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE3O75131 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE3O75131 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CPNE3O75131 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.31■□□□□ 0.36
CPNE3O75131 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.31■□□□□ 0.36
CPNE3O75131 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE3O75131 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE3O75131 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE3O75131 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE3O75131 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE3O75131 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE3O75131 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE3O75131 RN7SL606P-201ENST00000472779 293 ntBASIC17.31■□□□□ 0.36
CPNE3O75131 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.31■□□□□ 0.36
CPNE3O75131 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE3O75131 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE3O75131 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.31■□□□□ 0.36
CPNE3O75131 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.31■□□□□ 0.36
CPNE3O75131 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.31■□□□□ 0.36
CPNE3O75131 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.31■□□□□ 0.36
CPNE3O75131 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE3O75131 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE3O75131 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE3O75131 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CPNE3O75131 MYLKP1-201ENST00000509077 1580 ntBASIC17.31■□□□□ 0.36
CPNE3O75131 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE3O75131 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE3O75131 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE3O75131 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE3O75131 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE3O75131 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE3O75131 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CPNE3O75131 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE3O75131 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE3O75131 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CPNE3O75131 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE3O75131 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE3O75131 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.3■□□□□ 0.36
CPNE3O75131 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE3O75131 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CPNE3O75131 AL845331.1-201ENST00000424978 1190 ntBASIC17.3■□□□□ 0.36
CPNE3O75131 AC246785.2-201ENST00000432512 513 ntBASIC17.3■□□□□ 0.36
CPNE3O75131 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.3■□□□□ 0.36
CPNE3O75131 KRT17P6-201ENST00000453795 1220 ntBASIC17.3■□□□□ 0.36
CPNE3O75131 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE3O75131 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.3■□□□□ 0.36
CPNE3O75131 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.3■□□□□ 0.36
CPNE3O75131 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.3■□□□□ 0.36
CPNE3O75131 AL732292.2-201ENST00000609649 430 ntBASIC17.3■□□□□ 0.36
CPNE3O75131 AC004263.2-201ENST00000617183 678 ntBASIC17.3■□□□□ 0.36
CPNE3O75131 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.3■□□□□ 0.36
CPNE3O75131 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.3■□□□□ 0.36
CPNE3O75131 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE3O75131 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CPNE3O75131 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CPNE3O75131 AC012313.1-201ENST00000593393 3059 ntBASIC17.3■□□□□ 0.36
CPNE3O75131 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CPNE3O75131 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE3O75131 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE3O75131 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE3O75131 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE3O75131 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
CPNE3O75131 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CPNE3O75131 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.3■□□□□ 0.36
CPNE3O75131 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE3O75131 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE3O75131 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.29■□□□□ 0.36
CPNE3O75131 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE3O75131 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CPNE3O75131 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.29■□□□□ 0.36
CPNE3O75131 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CPNE3O75131 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CPNE3O75131 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE3O75131 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CPNE3O75131 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CPNE3O75131 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
CPNE3O75131 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE3O75131 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms