Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LCMT2O60294 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LCMT2O60294 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.25■□□□□ 0.35
LCMT2O60294 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.25■□□□□ 0.35
LCMT2O60294 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.25■□□□□ 0.35
LCMT2O60294 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LCMT2O60294 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LCMT2O60294 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LCMT2O60294 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.25■□□□□ 0.35
LCMT2O60294 KRT18P65-201ENST00000439811 1286 ntBASIC17.25■□□□□ 0.35
LCMT2O60294 AC068472.1-201ENST00000474589 881 ntBASIC17.25■□□□□ 0.35
LCMT2O60294 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
LCMT2O60294 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.25■□□□□ 0.35
LCMT2O60294 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LCMT2O60294 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LCMT2O60294 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LCMT2O60294 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LCMT2O60294 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LCMT2O60294 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.25■□□□□ 0.35
LCMT2O60294 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LCMT2O60294 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LCMT2O60294 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.24■□□□□ 0.35
LCMT2O60294 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.24■□□□□ 0.35
LCMT2O60294 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LCMT2O60294 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LCMT2O60294 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LCMT2O60294 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LCMT2O60294 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LCMT2O60294 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LCMT2O60294 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LCMT2O60294 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.24■□□□□ 0.35
LCMT2O60294 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
LCMT2O60294 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
LCMT2O60294 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LCMT2O60294 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LCMT2O60294 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LCMT2O60294 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LCMT2O60294 BX276092.5-203ENST00000456199 560 ntBASIC17.24■□□□□ 0.35
LCMT2O60294 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.24■□□□□ 0.35
LCMT2O60294 RN7SL606P-201ENST00000472779 293 ntBASIC17.24■□□□□ 0.35
LCMT2O60294 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.24■□□□□ 0.35
LCMT2O60294 AC091076.1-201ENST00000610741 619 ntBASIC17.24■□□□□ 0.35
LCMT2O60294 AC009154.2-201ENST00000621177 724 ntBASIC17.24■□□□□ 0.35
LCMT2O60294 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.24■□□□□ 0.35
LCMT2O60294 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
LCMT2O60294 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LCMT2O60294 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LCMT2O60294 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LCMT2O60294 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LCMT2O60294 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LCMT2O60294 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.24■□□□□ 0.35
LCMT2O60294 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.24■□□□□ 0.35
LCMT2O60294 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LCMT2O60294 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LCMT2O60294 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.24■□□□□ 0.35
LCMT2O60294 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LCMT2O60294 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LCMT2O60294 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LCMT2O60294 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LCMT2O60294 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LCMT2O60294 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.23■□□□□ 0.35
LCMT2O60294 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LCMT2O60294 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
LCMT2O60294 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LCMT2O60294 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LCMT2O60294 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LCMT2O60294 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LCMT2O60294 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LCMT2O60294 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LCMT2O60294 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.23■□□□□ 0.35
LCMT2O60294 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
LCMT2O60294 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LCMT2O60294 AC100803.2-201ENST00000562459 1963 ntBASIC17.23■□□□□ 0.35
LCMT2O60294 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.23■□□□□ 0.35
LCMT2O60294 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
LCMT2O60294 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LCMT2O60294 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.23■□□□□ 0.35
LCMT2O60294 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LCMT2O60294 AL121672.3-201ENST00000608644 468 ntBASIC17.23■□□□□ 0.35
LCMT2O60294 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.23■□□□□ 0.35
LCMT2O60294 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.23■□□□□ 0.35
LCMT2O60294 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LCMT2O60294 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LCMT2O60294 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.23■□□□□ 0.35
LCMT2O60294 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LCMT2O60294 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LCMT2O60294 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LCMT2O60294 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LCMT2O60294 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LCMT2O60294 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
LCMT2O60294 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LCMT2O60294 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LCMT2O60294 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LCMT2O60294 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LCMT2O60294 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LCMT2O60294 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LCMT2O60294 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
LCMT2O60294 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LCMT2O60294 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LCMT2O60294 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms