Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSSCA1O60232 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SSSCA1O60232 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSSCA1O60232 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
SSSCA1O60232 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSSCA1O60232 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.74□□□□□ -0.05
SSSCA1O60232 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SSSCA1O60232 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.74□□□□□ -0.05
SSSCA1O60232 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSSCA1O60232 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.74□□□□□ -0.05
SSSCA1O60232 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSSCA1O60232 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.74□□□□□ -0.05
SSSCA1O60232 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
SSSCA1O60232 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSSCA1O60232 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC14.74□□□□□ -0.05
SSSCA1O60232 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SSSCA1O60232 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
SSSCA1O60232 WT1-AS_3.1-201ENST00000613262 234 ntBASIC14.74□□□□□ -0.05
SSSCA1O60232 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SSSCA1O60232 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSSCA1O60232 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC14.74□□□□□ -0.05
SSSCA1O60232 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSSCA1O60232 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSSCA1O60232 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SSSCA1O60232 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSSCA1O60232 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.74□□□□□ -0.05
SSSCA1O60232 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SSSCA1O60232 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SSSCA1O60232 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSSCA1O60232 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SSSCA1O60232 AL121761.2-201ENST00000598007 1648 ntBASIC14.74□□□□□ -0.05
SSSCA1O60232 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SSSCA1O60232 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSSCA1O60232 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSSCA1O60232 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSSCA1O60232 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.73□□□□□ -0.05
SSSCA1O60232 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC14.73□□□□□ -0.05
SSSCA1O60232 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSSCA1O60232 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
SSSCA1O60232 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SSSCA1O60232 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SSSCA1O60232 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.73□□□□□ -0.05
SSSCA1O60232 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSSCA1O60232 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
SSSCA1O60232 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSSCA1O60232 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC14.73□□□□□ -0.05
SSSCA1O60232 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.73□□□□□ -0.05
SSSCA1O60232 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SSSCA1O60232 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSSCA1O60232 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSSCA1O60232 TSPY6P-201ENST00000448518 926 ntBASIC14.73□□□□□ -0.05
SSSCA1O60232 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SSSCA1O60232 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC14.73□□□□□ -0.05
SSSCA1O60232 AL445675.2-201ENST00000620291 557 ntBASIC14.73□□□□□ -0.05
SSSCA1O60232 INO80E-214ENST00000620599 515 ntTSL 2 BASIC14.73□□□□□ -0.05
SSSCA1O60232 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSSCA1O60232 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC14.73□□□□□ -0.05
SSSCA1O60232 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SSSCA1O60232 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SSSCA1O60232 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
SSSCA1O60232 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSSCA1O60232 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSSCA1O60232 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSSCA1O60232 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SSSCA1O60232 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.73□□□□□ -0.05
SSSCA1O60232 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SSSCA1O60232 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSSCA1O60232 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SSSCA1O60232 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SSSCA1O60232 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSSCA1O60232 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
SSSCA1O60232 AL118508.1-201ENST00000613502 2345 ntBASIC14.72□□□□□ -0.05
SSSCA1O60232 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC14.72□□□□□ -0.05
SSSCA1O60232 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSSCA1O60232 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSSCA1O60232 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SSSCA1O60232 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SSSCA1O60232 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SSSCA1O60232 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSSCA1O60232 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSSCA1O60232 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC14.72□□□□□ -0.05
SSSCA1O60232 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC14.72□□□□□ -0.05
SSSCA1O60232 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC14.72□□□□□ -0.05
SSSCA1O60232 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SSSCA1O60232 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC14.72□□□□□ -0.05
SSSCA1O60232 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC14.72□□□□□ -0.05
SSSCA1O60232 AC098934.4-201ENST00000564127 592 ntBASIC14.72□□□□□ -0.05
SSSCA1O60232 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
SSSCA1O60232 MIR5787-201ENST00000611784 55 ntBASIC14.72□□□□□ -0.05
SSSCA1O60232 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SSSCA1O60232 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSSCA1O60232 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSSCA1O60232 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSSCA1O60232 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSSCA1O60232 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
SSSCA1O60232 KRT8P50-201ENST00000562022 1438 ntBASIC14.72□□□□□ -0.05
SSSCA1O60232 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC14.72□□□□□ -0.05
SSSCA1O60232 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSSCA1O60232 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSSCA1O60232 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms