Protein–RNA interactions for Protein: O43889

CREB3, Cyclic AMP-responsive element-binding protein 3, humanhuman

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3O43889 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CREB3O43889 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CREB3O43889 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CREB3O43889 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CREB3O43889 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
CREB3O43889 LINC01311-201ENST00000565162 1445 ntBASIC18.83■□□□□ 0.6
CREB3O43889 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CREB3O43889 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CREB3O43889 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CREB3O43889 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CREB3O43889 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.82■□□□□ 0.6
CREB3O43889 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CREB3O43889 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CREB3O43889 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.82■□□□□ 0.6
CREB3O43889 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CREB3O43889 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CREB3O43889 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CREB3O43889 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CREB3O43889 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
CREB3O43889 HBZP1-201ENST00000354915 429 ntBASIC18.82■□□□□ 0.6
CREB3O43889 HLA-F-220ENST00000434407 884 ntBASIC18.82■□□□□ 0.6
CREB3O43889 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.82■□□□□ 0.6
CREB3O43889 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CREB3O43889 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.82■□□□□ 0.6
CREB3O43889 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.82■□□□□ 0.6
CREB3O43889 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CREB3O43889 AC024563.2-201ENST00000603282 481 ntBASIC18.82■□□□□ 0.6
CREB3O43889 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.82■□□□□ 0.6
CREB3O43889 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CREB3O43889 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.82■□□□□ 0.6
CREB3O43889 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CREB3O43889 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CREB3O43889 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.82■□□□□ 0.6
CREB3O43889 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.82■□□□□ 0.6
CREB3O43889 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CREB3O43889 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.82■□□□□ 0.6
CREB3O43889 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CREB3O43889 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CREB3O43889 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CREB3O43889 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CREB3O43889 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.81■□□□□ 0.6
CREB3O43889 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CREB3O43889 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.81■□□□□ 0.6
CREB3O43889 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
CREB3O43889 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
CREB3O43889 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CREB3O43889 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
CREB3O43889 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.81■□□□□ 0.6
CREB3O43889 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CREB3O43889 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CREB3O43889 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CREB3O43889 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.81■□□□□ 0.6
CREB3O43889 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.81■□□□□ 0.6
CREB3O43889 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CREB3O43889 HYMAI.1-201ENST00000620949 238 ntBASIC18.81■□□□□ 0.6
CREB3O43889 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.81■□□□□ 0.6
CREB3O43889 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CREB3O43889 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CREB3O43889 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CREB3O43889 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CREB3O43889 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CREB3O43889 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.81■□□□□ 0.6
CREB3O43889 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CREB3O43889 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CREB3O43889 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.8■□□□□ 0.6
CREB3O43889 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.8■□□□□ 0.6
CREB3O43889 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CREB3O43889 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CREB3O43889 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CREB3O43889 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CREB3O43889 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CREB3O43889 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CREB3O43889 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CREB3O43889 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CREB3O43889 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CREB3O43889 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.8■□□□□ 0.6
CREB3O43889 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CREB3O43889 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CREB3O43889 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.8■□□□□ 0.6
CREB3O43889 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.8■□□□□ 0.6
CREB3O43889 AL671277.2-201ENST00000458060 996 ntBASIC18.8■□□□□ 0.6
CREB3O43889 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.8■□□□□ 0.6
CREB3O43889 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.8■□□□□ 0.6
CREB3O43889 VENTXP5-201ENST00000523979 775 ntBASIC18.8■□□□□ 0.6
CREB3O43889 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.8■□□□□ 0.6
CREB3O43889 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CREB3O43889 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.8■□□□□ 0.6
CREB3O43889 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
CREB3O43889 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CREB3O43889 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CREB3O43889 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.8■□□□□ 0.6
CREB3O43889 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CREB3O43889 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CREB3O43889 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CREB3O43889 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CREB3O43889 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CREB3O43889 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CREB3O43889 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CREB3O43889 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.79■□□□□ 0.6
CREB3O43889 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms