Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 KRT18P65-201ENST00000439811 1286 ntBASIC20.27■□□□□ 0.84
CHMP2AO43633 DUSP5P1-201ENST00000441325 1139 ntBASIC20.27■□□□□ 0.84
CHMP2AO43633 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP2AO43633 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.27■□□□□ 0.84
CHMP2AO43633 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.27■□□□□ 0.84
CHMP2AO43633 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.27■□□□□ 0.84
CHMP2AO43633 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
CHMP2AO43633 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.27■□□□□ 0.84
CHMP2AO43633 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.27■□□□□ 0.84
CHMP2AO43633 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.27■□□□□ 0.84
CHMP2AO43633 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP2AO43633 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP2AO43633 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CHMP2AO43633 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CHMP2AO43633 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
CHMP2AO43633 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.27■□□□□ 0.83
CHMP2AO43633 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP2AO43633 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP2AO43633 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP2AO43633 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP2AO43633 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP2AO43633 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP2AO43633 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP2AO43633 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.26■□□□□ 0.83
CHMP2AO43633 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP2AO43633 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP2AO43633 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP2AO43633 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
CHMP2AO43633 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.26■□□□□ 0.83
CHMP2AO43633 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.26■□□□□ 0.83
CHMP2AO43633 VENTXP7-201ENST00000475503 772 ntBASIC20.26■□□□□ 0.83
CHMP2AO43633 AC104819.1-201ENST00000504587 486 ntBASIC20.26■□□□□ 0.83
CHMP2AO43633 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.26■□□□□ 0.83
CHMP2AO43633 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.26■□□□□ 0.83
CHMP2AO43633 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.26■□□□□ 0.83
CHMP2AO43633 Z69720.1-201ENST00000601483 472 ntBASIC20.26■□□□□ 0.83
CHMP2AO43633 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.26■□□□□ 0.83
CHMP2AO43633 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.26■□□□□ 0.83
CHMP2AO43633 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP2AO43633 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CHMP2AO43633 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP2AO43633 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP2AO43633 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP2AO43633 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP2AO43633 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP2AO43633 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP2AO43633 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP2AO43633 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
CHMP2AO43633 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP2AO43633 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP2AO43633 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP2AO43633 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20.25■□□□□ 0.83
CHMP2AO43633 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP2AO43633 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP2AO43633 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP2AO43633 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP2AO43633 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP2AO43633 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CHMP2AO43633 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.25■□□□□ 0.83
CHMP2AO43633 MTCL1P1-201ENST00000446207 792 ntBASIC20.25■□□□□ 0.83
CHMP2AO43633 KRT17P6-201ENST00000453795 1220 ntBASIC20.25■□□□□ 0.83
CHMP2AO43633 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP2AO43633 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.25■□□□□ 0.83
CHMP2AO43633 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.25■□□□□ 0.83
CHMP2AO43633 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.25■□□□□ 0.83
CHMP2AO43633 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.25■□□□□ 0.83
CHMP2AO43633 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP2AO43633 AC138894.3-201ENST00000603787 634 ntBASIC20.25■□□□□ 0.83
CHMP2AO43633 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.25■□□□□ 0.83
CHMP2AO43633 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.25■□□□□ 0.83
CHMP2AO43633 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP2AO43633 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CHMP2AO43633 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP2AO43633 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP2AO43633 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP2AO43633 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP2AO43633 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.25■□□□□ 0.83
CHMP2AO43633 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP2AO43633 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP2AO43633 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.25■□□□□ 0.83
CHMP2AO43633 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.25■□□□□ 0.83
CHMP2AO43633 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP2AO43633 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CHMP2AO43633 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP2AO43633 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP2AO43633 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP2AO43633 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.24■□□□□ 0.83
CHMP2AO43633 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP2AO43633 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.24■□□□□ 0.83
CHMP2AO43633 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.24■□□□□ 0.83
CHMP2AO43633 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP2AO43633 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.24■□□□□ 0.83
CHMP2AO43633 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.24■□□□□ 0.83
CHMP2AO43633 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.24■□□□□ 0.83
CHMP2AO43633 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP2AO43633 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP2AO43633 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP2AO43633 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP2AO43633 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP2AO43633 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms