Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
FOXN1O15353 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
FOXN1O15353 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
FOXN1O15353 BEX3-201ENST00000361298 921 ntTSL 2 BASIC21.5■■□□□ 1.03
FOXN1O15353 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
FOXN1O15353 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
FOXN1O15353 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.5■■□□□ 1.03
FOXN1O15353 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC21.5■■□□□ 1.03
FOXN1O15353 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC21.5■■□□□ 1.03
FOXN1O15353 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC21.5■■□□□ 1.03
FOXN1O15353 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC21.5■■□□□ 1.03
FOXN1O15353 AF228730.6-201ENST00000641497 218 ntBASIC21.5■■□□□ 1.03
FOXN1O15353 AC084121.3-201ENST00000641716 218 ntBASIC21.5■■□□□ 1.03
FOXN1O15353 AC105233.6-201ENST00000642093 218 ntBASIC21.5■■□□□ 1.03
FOXN1O15353 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
FOXN1O15353 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
FOXN1O15353 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
FOXN1O15353 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
FOXN1O15353 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
FOXN1O15353 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.5■■□□□ 1.03
FOXN1O15353 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
FOXN1O15353 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
FOXN1O15353 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
FOXN1O15353 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
FOXN1O15353 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
FOXN1O15353 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
FOXN1O15353 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.49■■□□□ 1.03
FOXN1O15353 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
FOXN1O15353 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.49■■□□□ 1.03
FOXN1O15353 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
FOXN1O15353 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC21.49■■□□□ 1.03
FOXN1O15353 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
FOXN1O15353 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
FOXN1O15353 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
FOXN1O15353 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
FOXN1O15353 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC21.49■■□□□ 1.03
FOXN1O15353 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC21.49■■□□□ 1.03
FOXN1O15353 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC21.49■■□□□ 1.03
FOXN1O15353 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
FOXN1O15353 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC21.49■■□□□ 1.03
FOXN1O15353 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC21.49■■□□□ 1.03
FOXN1O15353 AC010240.3-201ENST00000607688 395 ntBASIC21.49■■□□□ 1.03
FOXN1O15353 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC21.49■■□□□ 1.03
FOXN1O15353 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
FOXN1O15353 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
FOXN1O15353 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
FOXN1O15353 AC009113.1-201ENST00000570267 2443 ntBASIC21.49■■□□□ 1.03
FOXN1O15353 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
FOXN1O15353 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
FOXN1O15353 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
FOXN1O15353 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
FOXN1O15353 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
FOXN1O15353 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
FOXN1O15353 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
FOXN1O15353 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
FOXN1O15353 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC21.48■■□□□ 1.03
FOXN1O15353 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.48■■□□□ 1.03
FOXN1O15353 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.48■■□□□ 1.03
FOXN1O15353 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC21.48■■□□□ 1.03
FOXN1O15353 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
FOXN1O15353 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
FOXN1O15353 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
FOXN1O15353 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
FOXN1O15353 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
FOXN1O15353 RCN1P2-201ENST00000398357 915 ntBASIC21.48■■□□□ 1.03
FOXN1O15353 HLA-V-201ENST00000429037 534 ntBASIC21.48■■□□□ 1.03
FOXN1O15353 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
FOXN1O15353 OR7E14P-202ENST00000530490 1290 ntBASIC21.48■■□□□ 1.03
FOXN1O15353 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
FOXN1O15353 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
FOXN1O15353 TEN1-204ENST00000588202 862 ntTSL 3 BASIC21.48■■□□□ 1.03
FOXN1O15353 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC21.48■■□□□ 1.03
FOXN1O15353 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
FOXN1O15353 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
FOXN1O15353 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC21.48■■□□□ 1.03
FOXN1O15353 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
FOXN1O15353 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
FOXN1O15353 AL031598.1-201ENST00000561511 1773 ntBASIC21.48■■□□□ 1.03
FOXN1O15353 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
FOXN1O15353 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
FOXN1O15353 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC21.48■■□□□ 1.03
FOXN1O15353 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
FOXN1O15353 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
FOXN1O15353 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
FOXN1O15353 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
FOXN1O15353 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.47■■□□□ 1.03
FOXN1O15353 FEM1AP3-201ENST00000403722 1741 ntBASIC21.47■■□□□ 1.03
FOXN1O15353 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
FOXN1O15353 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
FOXN1O15353 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC21.47■■□□□ 1.03
FOXN1O15353 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
FOXN1O15353 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
FOXN1O15353 CRCP-205ENST00000431089 942 ntTSL 2 BASIC21.47■■□□□ 1.03
FOXN1O15353 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC21.47■■□□□ 1.03
FOXN1O15353 AC190387.1-201ENST00000551683 408 ntBASIC21.47■■□□□ 1.03
FOXN1O15353 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC21.47■■□□□ 1.03
FOXN1O15353 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC21.47■■□□□ 1.03
FOXN1O15353 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC21.47■■□□□ 1.03
FOXN1O15353 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
FOXN1O15353 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms