Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 AC233263.1-201ENST00000578059 224 ntBASIC12.37□□□□□ -0.43
NDUFA1O15239 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC12.37□□□□□ -0.43
NDUFA1O15239 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC12.37□□□□□ -0.43
NDUFA1O15239 AC124016.1-201ENST00000609552 612 ntBASIC12.37□□□□□ -0.43
NDUFA1O15239 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
NDUFA1O15239 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC12.37□□□□□ -0.43
NDUFA1O15239 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NDUFA1O15239 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC12.37□□□□□ -0.43
NDUFA1O15239 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC12.37□□□□□ -0.43
NDUFA1O15239 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NDUFA1O15239 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC12.37□□□□□ -0.43
NDUFA1O15239 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NDUFA1O15239 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NDUFA1O15239 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NDUFA1O15239 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
NDUFA1O15239 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
NDUFA1O15239 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NDUFA1O15239 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NDUFA1O15239 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
NDUFA1O15239 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
NDUFA1O15239 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC12.37□□□□□ -0.43
NDUFA1O15239 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC12.37□□□□□ -0.43
NDUFA1O15239 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC12.37□□□□□ -0.43
NDUFA1O15239 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC12.37□□□□□ -0.43
NDUFA1O15239 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFA1O15239 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFA1O15239 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFA1O15239 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC12.36□□□□□ -0.43
NDUFA1O15239 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
NDUFA1O15239 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFA1O15239 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC12.36□□□□□ -0.43
NDUFA1O15239 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFA1O15239 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC12.36□□□□□ -0.43
NDUFA1O15239 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC12.36□□□□□ -0.43
NDUFA1O15239 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFA1O15239 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFA1O15239 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFA1O15239 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC12.36□□□□□ -0.43
NDUFA1O15239 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFA1O15239 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFA1O15239 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFA1O15239 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
NDUFA1O15239 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC12.36□□□□□ -0.43
NDUFA1O15239 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFA1O15239 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFA1O15239 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFA1O15239 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFA1O15239 ISG20-202ENST00000379224 540 ntTSL 3 BASIC12.36□□□□□ -0.43
NDUFA1O15239 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFA1O15239 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFA1O15239 AC004951.3-201ENST00000418645 1148 ntBASIC12.36□□□□□ -0.43
NDUFA1O15239 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFA1O15239 KSR1P1-201ENST00000446298 240 ntBASIC12.36□□□□□ -0.43
NDUFA1O15239 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC12.36□□□□□ -0.43
NDUFA1O15239 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
NDUFA1O15239 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC12.36□□□□□ -0.43
NDUFA1O15239 KRT18P41-201ENST00000518924 1277 ntBASIC12.36□□□□□ -0.43
NDUFA1O15239 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC12.36□□□□□ -0.43
NDUFA1O15239 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC12.36□□□□□ -0.43
NDUFA1O15239 KRT18P6-201ENST00000555540 1265 ntBASIC12.36□□□□□ -0.43
NDUFA1O15239 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
NDUFA1O15239 TBCB-214ENST00000629269 413 ntTSL 5 BASIC12.36□□□□□ -0.43
NDUFA1O15239 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC12.36□□□□□ -0.43
NDUFA1O15239 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFA1O15239 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFA1O15239 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
NDUFA1O15239 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
NDUFA1O15239 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
NDUFA1O15239 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFA1O15239 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFA1O15239 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFA1O15239 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC12.36□□□□□ -0.43
NDUFA1O15239 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFA1O15239 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFA1O15239 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFA1O15239 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFA1O15239 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFA1O15239 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
NDUFA1O15239 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFA1O15239 HTR7P1-201ENST00000538670 1336 ntBASIC12.36□□□□□ -0.43
NDUFA1O15239 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFA1O15239 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NDUFA1O15239 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
NDUFA1O15239 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NDUFA1O15239 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
NDUFA1O15239 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
NDUFA1O15239 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
NDUFA1O15239 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NDUFA1O15239 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
NDUFA1O15239 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC12.35□□□□□ -0.43
NDUFA1O15239 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
NDUFA1O15239 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
NDUFA1O15239 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
NDUFA1O15239 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC12.35□□□□□ -0.43
NDUFA1O15239 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC12.35□□□□□ -0.43
NDUFA1O15239 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
NDUFA1O15239 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NDUFA1O15239 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC12.35□□□□□ -0.43
NDUFA1O15239 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
NDUFA1O15239 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms